Gene Lreu_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1328 
Symbol 
ID5188512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1384046 
End bp1384654 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID640591184 
Productmembrane protein-like protein 
Protein accessionYP_001271922 
Protein GI148544552 
COG category[S] Function unknown 
COG ID[COG4684] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.49804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAA CTCGGCACCA ACAAATTAGG CACAATACGA CATTAGCAAT CTTTATCGCA 
ATTATTCTCT TACAAGATTT TGTCCCATTT TTTGGTAACA TTCCGCTAGG ACCGCTTAGT 
ATTACGACCC TTCATGTAAC AGTCATTATT GCGGCAATTG TGTTGGGTCC CGTTGATGGC 
GCAATTATTG GTGGTATTTG GGGGCTCCTG ACTTGGGTGC GAGCATTTGT GGCACCAAGT 
AGTCCGCTGG CTCCCTTAGT TTTTGTTAAC CCGCTTGTTT CCGTTGTCCC GCGCATTATG 
ATTGGGATTT TAGCAGGATA TACTTTTATT CTTATGTGTC GTTTGGTCAA AGCAAAATAT 
ATCGCCGCGG TAAGTGCTGC AATAGTAGGA ACCCTTACTA ATACTGGCTT GGTATTAGGC 
TTTATTTATC TATTTTATCG TACTCCAGCA GTTGCGCAAA CTTATGGGGT AAATGTTAAT 
CATTTATTAA TTGCTTTAGA AACAGTCATG GCGACTAATG GGCTCGCAGA ATTGATATTG 
GCAATTATTA TTGTCCCGAT GGTTGCTCTT CCGGTATTGG AAGTCCGCCG TCGTTTGGAA 
GTAAATTGA
 
Protein sequence
MAKTRHQQIR HNTTLAIFIA IILLQDFVPF FGNIPLGPLS ITTLHVTVII AAIVLGPVDG 
AIIGGIWGLL TWVRAFVAPS SPLAPLVFVN PLVSVVPRIM IGILAGYTFI LMCRLVKAKY 
IAAVSAAIVG TLTNTGLVLG FIYLFYRTPA VAQTYGVNVN HLLIALETVM ATNGLAELIL 
AIIIVPMVAL PVLEVRRRLE VN