Gene Lreu_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1296 
Symbol 
ID5188403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1343808 
End bp1344995 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content43% 
IMG OID640591138 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_001271890 
Protein GI148544520 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0081249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC GACATTTATT TACATCCGAA TCAGTATCAG AAGGACATCC AGATAAGATT 
GCTGACCAAA TCAGTGACGC GATCTTAGAT GAATTGCTTA AGAAGGATCC TGATTCACGG
GTTGCAGTTG AAACCTCAGT TACTACTGGA CTAGTATTAG TCTTTGGTGA AGTTTCTACT
AAGGCCTACG TTAATATCCA ACAGATTGTG CGGGACACAA TTCGTAAGAT CGGTTATACA
GATGGCAAGT ACGGTTTCGA TGCTGATAAC TGTGCTGTTA TCACTGCGAT TGATGAACAA
TCACCAGACA TTGCGCAAGG GGTTGATGAC TCCTTAGAAA CGCGTGAAGG TGAAGCTGAT
CCGCTTGATA AGATTGGTGC CGGTGACCAA GGATTGATGT TTGGTTACGC TACTGACGAA
ACACCTGAAT ATATGCCATT AACATTGGTT TTAAGCCATA AGTTAATGCG TAAGATTGCT
CAACTACGTA AGGATGGCGT TATCTCTTAC CTTCGTCCAG ATGCAAAGGC CGAAGTAACC
GTAGAATACG ATGAGAATGA CAAGCCATTA CGTGTTGACA CCGTTGTTTT AAGTACCCAG
CATGATCCAG AGGTTTCACT TGATCAAATT AAAAAGGATA TTAAAGAACA AGTGATTGAA
GCTGTCATTC CAGCTGAGTA CCTTGATGAC CAAACTAAGT ACTTCATTAA TCCAACAGGT
CGGTTTGTAA TCGGTGGACC GCAAGGGGAT GCCGGTTTAA CGGGACGGAA GATTATTGTT
GATACTTATG GTGGGGCTGC TCATCACGGT GGTGGAGCCT TTTCTGGAAA GGATGCTACT
AAGGTTGACC GTTCTGCTAG TTATGCTGCG CGTTATATTG CTAAAAACAT TGTCGCAGCT
GGTTATGCTA AGAAGGCCGA GATTCAAGTT GCTTATGCCA TCGGTGTCGC AGAACCAGTA
TCAATCATGA TTAATACTTA TGGTACTGGT ACCCGTTCAG AAGAAGAATT AATTGCCGCT
GTTCGAAAAG CATTTGATTT ACGTCCAGCT GGAATTATTG AAATGCTCGA CTTGAAGCGG
CCAATTTACA AGCAAACTGC TGCTTATGGT CACTTTGGCC GGACTGATGT GGACTTACCA
TGGGAACACC TTGATAAAGT TGACGAATTA AAAGAAATTT TAGGCTAA
 
Protein sequence
MAERHLFTSE SVSEGHPDKI ADQISDAILD ELLKKDPDSR VAVETSVTTG LVLVFGEVST 
KAYVNIQQIV RDTIRKIGYT DGKYGFDADN CAVITAIDEQ SPDIAQGVDD SLETREGEAD
PLDKIGAGDQ GLMFGYATDE TPEYMPLTLV LSHKLMRKIA QLRKDGVISY LRPDAKAEVT
VEYDENDKPL RVDTVVLSTQ HDPEVSLDQI KKDIKEQVIE AVIPAEYLDD QTKYFINPTG
RFVIGGPQGD AGLTGRKIIV DTYGGAAHHG GGAFSGKDAT KVDRSASYAA RYIAKNIVAA
GYAKKAEIQV AYAIGVAEPV SIMINTYGTG TRSEEELIAA VRKAFDLRPA GIIEMLDLKR
PIYKQTAAYG HFGRTDVDLP WEHLDKVDEL KEILG