| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1293 |
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| Symbol | |
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| ID | 5188574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1338974 |
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| End bp | 1340623 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640591135 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001271887 |
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| Protein GI | 148544517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.619814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA ATAAAGTAAA TGATTTGAGC AGCACCGCAG TTAAAAAAGA TTCGCGAACA
AAAATGATTA CAGGATCAGC TTGGATGACA GCTGGTAGTA TTACTTCGCG GATCTTAGGG
GCGCTGTACA TTATTCCATG GGTTACATGG TTAGGAGCTT ACAGTAATGA AGCGAATGCC
TTATATGCTC AAGGGTACAA TATTTATAAT ATGTTTTTAG TGATTGCAAC GGCGGGAATT
CCTTCTGCAA TTTCTAAAAT GGTCGCGCAT TATAACGGAA TAAACCAGTA TGGCGTTAGT
CGCCGACTGT ATCATTCTGG AATGTACGTT GCAATGGCAA TGGGTGTAAT TTGTACGACA
GTGATGATGT TTGGGGCTCG TTTAATGGAT AACGGAGATC CAAATATGAT TCCGGTTATC
CGCTCGTTAG CTTGGGCTAT TTTGATTATC CCAGGGATGT CGATTACCCG AGGATTTTTA
CAAGGATATA ACTGGATGGC ACCATCAGCA ATTTCGCAAT TTGTTGAACA GCTTTTCCGA
GTTATTTATA TGCTGGCGGC TACTTATTTC ATCATGAAGA TTCAAAATGG TAATTGGGTT
AGCGCCGTTT CCCAATCAAC CTTTGCGGCC TTTATCGGGG CAATTGGTGC AGTAATTGTC
TTGGGAATTG CCTGGATGCG TCATCAACGT GAAATGAATG ACTTGGTGGC ACATGGTGAA
ATAAATACTG AAGTTTCAAC CCAAACATTA ATTTTTAAGA TTATTTATCA GTCAATTCCG
TTCATCATTA TTGAATCAGG GGTAACGATT TTCCAATTAA TTGACCAATA CACTTTTAAG
CGGATGATGC CATTAGTTGG TCACTTTACT AAGTACCAGA TGGATGTTAC TTATGCCTTA
TTCGCGTTTA ATGCCAATAA GCTTTACATG ATTGTTATTT CATTAGCTTC TGCATTAGCT
GCAACAGTTA TTCCGTTGCT TGCGACAGCC CGGGCTCAGA ACGATCAAGA GGATATGCGA
AAACAGATTC AAAACGTTCT CTTGTTATTC TATTTTGTGA TGATTCCGGC AGCTCTTGGA
TTATCCGCGG TTGCTCAGCA AATCTACACC GTCTTTTACC GTTATGATGC GGCAGGGGTC
GTAGTACTGC AATTTGCAGC TTACATTTCG ATCATGTTAG GCTTGTATAC TGTAGCCGCA
GCAATGATGC AGGGAATTTC TGAGAATAAG AAGATGATGA TGTTCTTAGC CATCGGAATC
GTAATTAAAT TTATCCTCCA GTTCCCATGT ATTTGGATCT TTGAAGGATT AGGACCACTG
GTTTCAACTG GGATTTCAAT GTTTGTGATT AACTATTTGA TCTTGCATTC CTTTAATATG
GAATTCCACC TACGTTTTGA TAAGATGGCC CTGCCAACTA ACCAGATTTT AGCTTACTCC
TTAGTGATGT TTGCTGGGAC AAAGATTGTA ATGTTAATCA TTGGCCATTT TGTTAGTCCA
TATGGGCGCT ACACTGCTTT CTTCTCCTTG ATTCCGGGAG TAATAGTCGG AGCAGGAATT
TATCTCTATC TCTGCTTAAA GTCACGATTA GCCGACCAGC TATTGGGACC ACGAGTAGCA
AGATTACGAA CGATTTTACA CATTAAATAA
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| Protein sequence | MEENKVNDLS STAVKKDSRT KMITGSAWMT AGSITSRILG ALYIIPWVTW LGAYSNEANA
LYAQGYNIYN MFLVIATAGI PSAISKMVAH YNGINQYGVS RRLYHSGMYV AMAMGVICTT
VMMFGARLMD NGDPNMIPVI RSLAWAILII PGMSITRGFL QGYNWMAPSA ISQFVEQLFR
VIYMLAATYF IMKIQNGNWV SAVSQSTFAA FIGAIGAVIV LGIAWMRHQR EMNDLVAHGE
INTEVSTQTL IFKIIYQSIP FIIIESGVTI FQLIDQYTFK RMMPLVGHFT KYQMDVTYAL
FAFNANKLYM IVISLASALA ATVIPLLATA RAQNDQEDMR KQIQNVLLLF YFVMIPAALG
LSAVAQQIYT VFYRYDAAGV VVLQFAAYIS IMLGLYTVAA AMMQGISENK KMMMFLAIGI
VIKFILQFPC IWIFEGLGPL VSTGISMFVI NYLILHSFNM EFHLRFDKMA LPTNQILAYS
LVMFAGTKIV MLIIGHFVSP YGRYTAFFSL IPGVIVGAGI YLYLCLKSRL ADQLLGPRVA
RLRTILHIK
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