| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1272 |
|---|
| Symbol | |
|---|
| ID | 5188698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1322707 |
|---|
| End bp | 1323645 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640591112 |
|---|
| Product | malate dehydrogenase (NAD) |
|---|
| Protein accession | YP_001271866 |
|---|
| Protein GI | 148544496 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000869025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATA CGTATAGGCA CAAAGTTGTA TTAATAGGTG ACGGGGCTGT CGGCTCATCA
TTTGCATTTT CATTATTGCA GTCAACAAAT GAGGTCGATG AATTGGTACT GGTGGATCGT
ACAAGGTCAA AAGCAGTTGG GGATGCGGCT GATCTTGCTG ATATTACACC CCTGACAAAC
CCAGTAAAGA TTTATGCGGG AACCTATGAA GATGCTGCTG ATGCTGACGT AGTTGTTATT
ACGGCTGGGA TTCCCCGTAA ACCTGGTGAA ACTCGTTTAG ACCTTGTTAA TAAAAACACT
ACGATTCTTA AGTCAATTAT TGAACCAATT GTCAAAAGCG GATTCACTGG TGTTTTCGTT
ATCTCGAGCA ATCCTGTTGA TATCCTTACA ACAATTGCGC AGCGAATCAG CGGGTTTCCT
AAAGAACGTG TTATTGGGAC CGGAACTTCT CTTGATTCAA TGCGGCTACG GGTCCTCTTA
AGCAAGAAAT TACACCTATC CGTCAATGTC ATCGATGCCT TAATGCTTGG CGAACATGGT
GATACTTCTT TTGCGGCCTT TAATGAAATC ACAATCGGTG GAAAGGCCCT CAATACAATT
ACTGCCCTTT CAAATACTGA TAAAAGTGAA ATTGAAAAAG CAGTTCACGA AGCTGGCAGT
CAAATAATTG CCAATAAAGG GGCTACTTTC TACGGAATTG CTAAATGCCT CTCGTATATT
ACACGGGCAA TCATCGAAAA CCGTAGTCTT GTCCTACCGA TTTCGGCTCC GCTTGATGGA
CAGTACGGAA TTAAGGGCCT GTACTTAGGC ACGCCTGCCA TCATTAATAG TCAAGGAATC
GGCCAGGTCG TTGAATATCC ATTAACATCA GATGAAGTTA AAAAGATGCA ACAGTCTGCT
GAAGCGATGC ATCAAGTTTT AGCTAAGATT GAGATCTAA
|
|---|
| Protein sequence | MLDTYRHKVV LIGDGAVGSS FAFSLLQSTN EVDELVLVDR TRSKAVGDAA DLADITPLTN
PVKIYAGTYE DAADADVVVI TAGIPRKPGE TRLDLVNKNT TILKSIIEPI VKSGFTGVFV
ISSNPVDILT TIAQRISGFP KERVIGTGTS LDSMRLRVLL SKKLHLSVNV IDALMLGEHG
DTSFAAFNEI TIGGKALNTI TALSNTDKSE IEKAVHEAGS QIIANKGATF YGIAKCLSYI
TRAIIENRSL VLPISAPLDG QYGIKGLYLG TPAIINSQGI GQVVEYPLTS DEVKKMQQSA
EAMHQVLAKI EI
|
|---|
| |