| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1269 |
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| Symbol | |
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| ID | 5189044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1317497 |
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| End bp | 1319662 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640591109 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001271863 |
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| Protein GI | 148544493 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000185819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGTG AACCACAATC TAATTCAGGT TTGAAAGAGC GAATCATAGA GTGGTTAAAA
AAGGCTTGGG CGTCATTCCG AGTTTGGTTT AAGCACTATT GGCAGCTCTT TGTTGCGATG
CTGAAAAAGT TCTGGCATCG TTATCAATTA ACGCGATGGA TCATTGTTAT TTTTCTAGGA
ATTTTCTTAA TTACTAGTAT CCATTTGACG TTTGTTGCTA AAACTGCAGA TGTTAAAAAT
CTTAAGAACC GGTTGCAACG GCCAACAATG ATTTATGATC GTAGCAATCA ATCGGCCGGG
AGCCTCTACG CTCAAAAGGG AACTTATGTG GAATTAAAAG ATATTTCATC AAACGTTCCT
AACGCGGTCC TCTCGACTGA AGACCGGAAC TTCTATCATG AACACGGCTT TTCAGTCAAA
GGGTTAGGCC GGGCTGGCTT CTTACTAGTG AAAAACAAAC TTCTTCACCG TGACTATATC
TCTGGTGGGG GTAGTACTTT AACACAGCAA CTGGTTAAGA ATGCCTTTTT GACTCAACAA
CAGACCTTCT CCCGAAAGGC CCGGGAAATT TTTATTGCGG TTGAGGTAGA AAACCAATAC
AGCAAAAATG AGATTTTAAC AATGTACCTC AATAATGCCT ACTTTGGTCA TGGGGTATGG
GGAGTTCAAG ATGCGGCTAA GCGTTACTTC AATGAAAACG CCAGTCAGCT AACGGTACCC
CAAGCAGCTA CCCTGGCCGG AATGCTGACG TCGCCAGGGA TGTACGACCC AGTAGAACAT
CCAACAGCGA CGAAGCAACG ACGGAATATG GTTCTTCAGC TGATGGTTGA AAATCATAAG
CTGAGTCAAA GTGCGGCGGA TCAATATAAG CAAACACCGT TGAATATTAC CAACGGCTAC
GTGCCAAATG ACAGCTATAA GTACCCGTAC TTCTTTGATG CGGTCATTGC CGAAGCAGAA
AGCCGTTATC ATATTTCGGA AAAAGATATC ATGAATAATG GTTATCGGAT TTATACGACG
CTGGATCAGG ATCAGCAGCG GTCAATGCAG CAAACTTATG ACGATGACGA TAATTTCCCA
CAGAACTCAG CCGATGGCAC AATGGTTCAA TCAGCCTCGA TTGCGATGAA TCCGAAAAAT
GGGGGAATTA CCGCGGTCGT TGGTGGACGT GGAAAACATG TCTTCCGTGG ATTTAACCGT
TCTACGCAGA TGCGGCGGCA GCCCGGGTCA ACGATTAAGC CGATTGTTGT ATATACACCA
GCCTTAGAGC ATGGATATTT CTATGATTCA ACGCTTCAAG ATAAGAAACA ATCGTATGGA
ACTAATAATT ACACGCCAAA GAACTACGAT GATACCTATA GCGGGACGGT GCCGATGTAT
AAGGCCCTTT ATGAGAGTCT TAACGCTCCG GCAGTCTGGT TATTAAATAA GATCGGGGTC
AATCGTGGTT ATGACATGGC AAAGAAGTTT GGCTTGCCAG TCGAAAAGGG TGATAAGAAC
CTTGCCTTGG CCCTCGGTGG TATGACTCGC GGAGTATCAC CGCAACAAAT GGCTCGTGCC
TATGCAGTCT TTGCCAATGA TGGGTTGATG CCATCCCCGC ACTACATTAC CAAGATTGAG
GATGCCTCTG GAAAAGTGAT TGCCAAAAAT GATGGTAGTA AAAACAAACG GATCATTTCT
GGTAAGACGG CTAAAGAGAT GACTAGTATG CTAATTGGCG TATTTGATCA CGGAACTGGT
GAAACGGCCA AACCAAGTGG CTATACGCTT GCCGGTAAAA CGGGGACTAC AAACTCAGGG
GTAAAAGGCG ATGATTCCAA TGATCGTGAT AAGTGGATCG TAGGTTATAC GCCCGATGTA
GTGGTTGCAA CGTGGGAAGG CTATGATGAT ACAAACCAAA GCCACACCCT AAACGATATT
TCTGAACGGA GCATTAACTA CCTTTACAAG AATGAAATGA GTGCGATTTT GCCAAATACT
GCTGGAACCA AATTCACGGT TGAAGATGCT CAAACACGGG CAAAAGAAAA GACAAAGGGT
TCCTCTAAAG GATGGGGATC ATTCCTCAAA GATGGGGACG ACTTTGTAAA TAATTTCAAC
CAATCAGTAA ATAATTTTGG TAATAAGGCG AGTCAATGGT GGAGCAATGT TCGATCGCTT
TTCTAG
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| Protein sequence | MNREPQSNSG LKERIIEWLK KAWASFRVWF KHYWQLFVAM LKKFWHRYQL TRWIIVIFLG
IFLITSIHLT FVAKTADVKN LKNRLQRPTM IYDRSNQSAG SLYAQKGTYV ELKDISSNVP
NAVLSTEDRN FYHEHGFSVK GLGRAGFLLV KNKLLHRDYI SGGGSTLTQQ LVKNAFLTQQ
QTFSRKAREI FIAVEVENQY SKNEILTMYL NNAYFGHGVW GVQDAAKRYF NENASQLTVP
QAATLAGMLT SPGMYDPVEH PTATKQRRNM VLQLMVENHK LSQSAADQYK QTPLNITNGY
VPNDSYKYPY FFDAVIAEAE SRYHISEKDI MNNGYRIYTT LDQDQQRSMQ QTYDDDDNFP
QNSADGTMVQ SASIAMNPKN GGITAVVGGR GKHVFRGFNR STQMRRQPGS TIKPIVVYTP
ALEHGYFYDS TLQDKKQSYG TNNYTPKNYD DTYSGTVPMY KALYESLNAP AVWLLNKIGV
NRGYDMAKKF GLPVEKGDKN LALALGGMTR GVSPQQMARA YAVFANDGLM PSPHYITKIE
DASGKVIAKN DGSKNKRIIS GKTAKEMTSM LIGVFDHGTG ETAKPSGYTL AGKTGTTNSG
VKGDDSNDRD KWIVGYTPDV VVATWEGYDD TNQSHTLNDI SERSINYLYK NEMSAILPNT
AGTKFTVEDA QTRAKEKTKG SSKGWGSFLK DGDDFVNNFN QSVNNFGNKA SQWWSNVRSL
F
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