Gene Lreu_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1263 
Symbol 
ID5189104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1311420 
End bp1311854 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content42% 
IMG OID640591103 
Producthistidine triad (HIT) protein 
Protein accessionYP_001271857 
Protein GI148544487 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00000437908 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA ATTGTATTTT CTGCAAAATC ATTAACGGTG AGATTCCTAG CTACACAGTT 
TATGAAGATG ACGTTGTAAA GGCCTTCCTT GATATTTCAC AAGGAACTCC TGGTCATACC 
CTCGTCATTC CGAAGAAGCA CGTTCCCGAT TTATTTGCCT ACGATGCTGA TCTCGCTGCC 
CAAGTATTTT CCCGTATTCC AAAGATTGCC CGGGCAGTTA AGGCTTCTAA CCCGGCCATC 
AAGGGGATGA ACGTGGTTAA CAACAACGGT GAAGTCGCTT ATCAATCTGT CTTCCACTCC 
CACTTCCACT TGATTCCACG GTACACTAGC GATGATGATT TTAAGATGAT TTTTAAGGAC 
AATTCTGGTA ACTACAACGA TGAAAAGTAC AAAGAAATCC AACAATCAAT CATCGATCAA 
ATGAAAGAAG ACTAG
 
Protein sequence
MDDNCIFCKI INGEIPSYTV YEDDVVKAFL DISQGTPGHT LVIPKKHVPD LFAYDADLAA 
QVFSRIPKIA RAVKASNPAI KGMNVVNNNG EVAYQSVFHS HFHLIPRYTS DDDFKMIFKD 
NSGNYNDEKY KEIQQSIIDQ MKED