| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1259 |
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| Symbol | |
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| ID | 5188597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1307479 |
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| End bp | 1308465 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640591099 |
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| Product | YSIRK Gram-positive signal peptide |
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| Protein accession | YP_001271853 |
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| Protein GI | 148544483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.076162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGA ACAATGCACA AGAATATGTA CGCAAAATGG AGCCGCAACG GCAACGATTT
GGATTAAGAA AACTCAGTGT TGGTGTTGCG TCTGTGTTAC TAGGAACTAC TTTTATGGTC
GGAGGTACAG TAGCACACGC TAATACTGAT AGTACACCGG CGCCAACCGC AGCAGAATCA
GTAAGCACTA ATGTCGTTAG TCAAAATGAT GCTCAATCAC AGGCAGCTAT TAGTTCACAA
ACAAGTGGAA GTCAAGTCGA AATGGTTACT AACAGAAATA AAAATGTAAT TAAAACTAAT
GACGTCCAAT TACAAAATTT AAATACACCA ATTGTAACTT CACTTTCAGC TACTATTAAT
TTAAACTGGA CTAATGAAAA CGGAGAGCCA GAAAATCTTC CAAGCATTAC TTATGAAGGT
AAAACTGGTG ATACTCTTCA AGATGTAGGT AAATACATTC AAGGTTTAAT AACTACAGAT
AATTCAAAGT ATGAAGTTTC CCCATTAGTA TCAACGCCTA AAGATACAGA AGATTATTTA
AGTGGAAATA CTGCAGACAG TATCACTGAT CCTAGTATGA AATTAGCCTA TGACGATTGG
CGTAAAAATA AAGAAAAGAA TTATCCTTTT GCGGGTTACA CTGTAGAGAT TGATTCATTA
TCGAATGCTC CATTAACAAA TGGAGGTACC TACACTATCA ATTTGGGAAC CGAAACTCGC
CTTTATAATG AACCATATTG GGTAATAACT TCACGCACTA TTCATTATGT AAAATATGGT
CTAACGGGTT CTGATAGTGT TGCTTCTCCA GATGTGATCC AGGAAGGTTA TTCAAATGTA
ACCAATTCTA AAAATAATCC AGTGGTAAAG AACTTTAATT TAGAAAAAGA TGGTCATCAC
TATGTGAGTT ATGAAACGGT TCAAAGATCG TATAATGTAG CTTCTGGTAT TCCTGATGGG
ATGACAGATA AACCCAACTA TTACTGA
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| Protein sequence | MSKNNAQEYV RKMEPQRQRF GLRKLSVGVA SVLLGTTFMV GGTVAHANTD STPAPTAAES
VSTNVVSQND AQSQAAISSQ TSGSQVEMVT NRNKNVIKTN DVQLQNLNTP IVTSLSATIN
LNWTNENGEP ENLPSITYEG KTGDTLQDVG KYIQGLITTD NSKYEVSPLV STPKDTEDYL
SGNTADSITD PSMKLAYDDW RKNKEKNYPF AGYTVEIDSL SNAPLTNGGT YTINLGTETR
LYNEPYWVIT SRTIHYVKYG LTGSDSVASP DVIQEGYSNV TNSKNNPVVK NFNLEKDGHH
YVSYETVQRS YNVASGIPDG MTDKPNYY
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