Gene Lreu_1251 details

Gene Information

• Locus tag: Lreu_1251
• ID: 5189171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: -
• Start bp: 1297583
• End bp: 1298230
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640591091
• Product: tRNA-binding domain-containing protein
• Protein accession: YP_001271845
• Protein GI: 148544475
• COG category: [R] General function prediction only
• COG ID: [COG0073] EMAP domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000000609794
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATTT CAAGTTACAA TCCCAATGAA TTAGGCGACA TTTTAGTCGT TATTACCGCT 
CCAGATGCGG ATGACCAAAT TACTAAGATT GCTGATGATG TAGCTCAGAT CACCGCTGAA 
AAAGATGGTG CATTACTTGG CTATAACTTT ATGAACGCCA GCAAGATCTT ACCAGAATTA 
ACAAGTGAAA ACGGGCAAGT ATTTTTAGAT GCAGCCCAAG TTGAAAAATT AAATGCAAAG 
TTACAAGAAG CAGGCTTTGA TAAGCTCTTA ACAGCTGACG AAGATCCTAA ATTTGTGGTC 
GGTTATGTTG AAAAGATCAC TGACCATCCT AAGTCTGACC ACTTAAAAGT AACACAAACG 
CGGATTGCTG ATGATAAGAC TGTCCAAATC GTATGTGGAT CTCCTAATGT TGCAGAAGGT 
ATTAAAGTCG TAGTTGCTCG ACCTGGTGCG ATGATGCCAG ACGGTAAGAT CATTTGGCCT 
GGTCAATTGA TGGGTGTTGA TAGTGACGGA ATGCTCTGTG GTTTCCGTGA ACTACGGATT 
AAGAATGCGC CCGATGAAAA AGGCCTATTC ATTATCCCTG ATGATTGGCA AGAAGTCGGT 
GAACCGGTTG ATTTTGCTAA GGCCGATACG TTCTACCCAG AAAACTAA 

 

Protein sequence

MLISSYNPNE LGDILVVITA PDADDQITKI ADDVAQITAE KDGALLGYNF MNASKILPEL 
TSENGQVFLD AAQVEKLNAK LQEAGFDKLL TADEDPKFVV GYVEKITDHP KSDHLKVTQT 
RIADDKTVQI VCGSPNVAEG IKVVVARPGA MMPDGKIIWP GQLMGVDSDG MLCGFRELRI 
KNAPDEKGLF IIPDDWQEVG EPVDFAKADT FYPEN