Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1250 |
Symbol | murC |
ID | 5189251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1296152 |
End bp | 1297456 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591090 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001271844 |
Protein GI | 148544474 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000708446 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACAAA ATACATATTA CTTTGTTGGT ATTAAAGGGA CCGGGATGGC CTCTTTAGCA CGTATCCTTC ATGACAAAGG ACACCAAGTA CTAGGTTCAG ATATTGAAAA GGAAACATTT ACACAAGCGC CATTATTAGC GGCGGGAATT AAAATTTTGC CATTTGATCC AGCCAATTTG AAACCAGGGA TGATTGTTAT CCAAGGAAAC GCTTTTGATG ATGATCACCC AGAGATTAAA CGAGCACATG AATTAGGCCT TAAAATTTTA AGCTACCCTG AGGCTGTTGA AAATGAGGTT AAGAATCATA CTAGTATTGG GATTGCTGGA GCACACGGTA AGACCAGTAC GACTGCATTG TTATCACACG TATTAGCAGC GGTTGAACCA ACCAGCTACT TGATCGGTGA TGGGGTAGGT AAAGGAAATG CGGATGCACG CTTCTTTGTT TTTGAAGCCG ATGAATACCG TGATCACTTC CTTGCCTACC ATCCAGACTA TGCAATTATG ACGAACGTTG ACTTTGATCA CCCCGATTAC TTCAATGATT TGGCAGATGT CCGTGATTCA TTTGAAACGT ACGGTAAGCA GGTTCAACGG GCAATTTTTG CTTGGGGAGA TGATCCTAGT CTTCGTGACT TAAACGTTGA TGTTCCGGTT TACTACTATG GAACTAATCC AGATGATGAT TTCCGGGCAG AAAATATTCA ACGAACACCA GAAGGCTCAA CATATGATGC TTACTTCCGC GACCAAAAAC TCGGCACATT CACCATCCAC TTATATGGTG AACACAGTGT TCTTAATAGC TTAGCAGTAC TAGCAGTTGC ATACATGGAA CACATGAACA TGGATGAGAT TCAACAGGAA TTAGCTAACT TTAGTGGGGT AAAGCGTCGT TTCAGCGAGA CTGACATTGC GGATACAACC ATTATTGACG ACTATGCTCA CCATCCAAGC GAAATTAAGG CAACAATTGA TGCGGCACGG CAAAAGTACC CAGATCGTGA AGTTATTGCT GTTTTCCAAC CACACACATA CTCACGGTTG GCTGCTTACA TCGATGGCTT TGCAGAATCG CTTAGCCGGG CAGATAAGAC TTTTGTTACC CCGATCTTTG GTTCAATTCG TGAAAATGCT GGGAATGTTT CTAGTGCTGA TTTGGAGCAA CGGATTGACG GTAGTGAAGG CATCGACATG GATACCATGG ATAAACTTTT GCAATATCAT AATGCAGTAG TTGTTTTCAT GGGTGCCGGT GACGTTGAAA AGTACGAAGA AAAGTACAAA GAATTGTTAA AATAA
|
Protein sequence | MEQNTYYFVG IKGTGMASLA RILHDKGHQV LGSDIEKETF TQAPLLAAGI KILPFDPANL KPGMIVIQGN AFDDDHPEIK RAHELGLKIL SYPEAVENEV KNHTSIGIAG AHGKTSTTAL LSHVLAAVEP TSYLIGDGVG KGNADARFFV FEADEYRDHF LAYHPDYAIM TNVDFDHPDY FNDLADVRDS FETYGKQVQR AIFAWGDDPS LRDLNVDVPV YYYGTNPDDD FRAENIQRTP EGSTYDAYFR DQKLGTFTIH LYGEHSVLNS LAVLAVAYME HMNMDEIQQE LANFSGVKRR FSETDIADTT IIDDYAHHPS EIKATIDAAR QKYPDREVIA VFQPHTYSRL AAYIDGFAES LSRADKTFVT PIFGSIRENA GNVSSADLEQ RIDGSEGIDM DTMDKLLQYH NAVVVFMGAG DVEKYEEKYK ELLK
|
| |