Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1249 |
Symbol | |
ID | 5189349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1295347 |
End bp | 1296060 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640591089 |
Product | hypothetical protein |
Protein accession | YP_001271843 |
Protein GI | 148544473 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000770984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACT TTTCTCAAGA ACCAGGGCGT CGGGTTGTCA CTGACGCAGC TGGCTTGAAT AGTTTCTTGA CCCGAATGTA TGGAAACATG ACGTTGGCAG TTCTTGTTTC TGCATTCAGT GCTTACTTGA CCATGGGGGT ATTCCGGAGT GCCGTTTTCG GTTTCTTTAG TGCTCACCCT GGAATGGTTT GGGTTATCTT ATTGCTACCG ATTGCTTTGT CAATGGGGGT AAGCTTTAGT GCTACCCGGA ACCCAGTTGG GGCATTTGTT ATGCTGATGC TGACGGCAAT AATCTATGGT GTCGAGTTTG CAATTATTGC TGGTGTTTAT TCGGGAGCAA GCATTGCCTC AGCTTTCGTA TCATCCGCGG CTGTTTTTGT CACGATGGCT TTGTATGGGA CCATTACTAA GCGCGACTTA AGCAAGTTTG GTGCTCACGC GATGGCTGCC TTGATTGCTT TAATGATTGC TTACCTTATC AACATGTTCT TACAAAGTCC TGCCATTGCT TACATCTTCT CCTTTATCGC TGTTATTATC TTTACTGTTT TAACAGCTTG GGATGCACAA AAGATGAAGC AAATCTACAT CAACTATGGC GGCGAAGTAT CAACAAATGG TTTAGCTGTT CTAGGTGCCC TTCAATTGTA CTTAGACTTT GTAAACCTCT TTATCTCACT TCTTCAAATT TTTGGAATGA GTGACCGAAA TTAA
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Protein sequence | MNNFSQEPGR RVVTDAAGLN SFLTRMYGNM TLAVLVSAFS AYLTMGVFRS AVFGFFSAHP GMVWVILLLP IALSMGVSFS ATRNPVGAFV MLMLTAIIYG VEFAIIAGVY SGASIASAFV SSAAVFVTMA LYGTITKRDL SKFGAHAMAA LIALMIAYLI NMFLQSPAIA YIFSFIAVII FTVLTAWDAQ KMKQIYINYG GEVSTNGLAV LGALQLYLDF VNLFISLLQI FGMSDRN
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