Gene Lreu_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1248 
Symbol 
ID5189176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1294614 
End bp1295288 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID640591088 
Producthypothetical protein 
Protein accessionYP_001271842 
Protein GI148544472 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000457718 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TCATTAACTA TCAAAAGCCT GCAGAAGCAC GTCTCTTTGC CCTGCTCCTT 
ACTTTTAGCG GTGGCTTCAT CGATGCTTTT ACATATATCA AATGTGGGCG CACAATGGCA 
GCAGCCCAAA CTGGCAACAT TATTTTTCTT AGTGCCGCGC TTGCCAATCA CAATTTTCTC 
GGCGTCGTTG ATCGGCTCGG CTCATTGATT GCATTTATTC TTGGATTAGC AATGGTCAGC 
ATCCTGCACG CTCATTTAAG AACTGATTAT TGGCGAGTAG TTTGTCTGTT GCCGATTTTA 
TTAGTAGGAG CAATTATCGG TTTTCTCCCG GATAGCTTTC CTGACTATCT GATGGTACCA 
GCCGTTTCAT TTGGTCTTGC AATGCAAAGT GCCGCTTTCA GTAAAATCGA AGGGCTCGGT 
TATAACAGCG TCTTTACAAG CGGCAGTGTC AAAAAAGCTG CGGTTGCCTG GAGCGAATAT 
TATTTTCATC ACGATCGCTC GCAACGATCA GCCGCCTTTA GTTATTTAAT GATCGTGATC 
TGTTTTACGC TTGGCGCGAT CATTTCCGCT CAGTTGCTTC CCTTTTTCCG AATGAAAACT 
ATCTGGATCG CAACGTTCTT GATTCTCGTA ACTGATAGTT CTTATTATTT AACAAAAAAG 
AATGCTAAAA ATTAA
 
Protein sequence
MDKLINYQKP AEARLFALLL TFSGGFIDAF TYIKCGRTMA AAQTGNIIFL SAALANHNFL 
GVVDRLGSLI AFILGLAMVS ILHAHLRTDY WRVVCLLPIL LVGAIIGFLP DSFPDYLMVP 
AVSFGLAMQS AAFSKIEGLG YNSVFTSGSV KKAAVAWSEY YFHHDRSQRS AAFSYLMIVI 
CFTLGAIISA QLLPFFRMKT IWIATFLILV TDSSYYLTKK NAKN