Gene Lreu_1244 details

Gene Information

• Locus tag: Lreu_1244
• Symbol: nrdR
• ID: 5189340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: -
• Start bp: 1289867
• End bp: 1290331
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640591084
• Product: transcriptional regulator NrdR
• Protein accession: YP_001271838
• Protein GI: 148544468
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000621144
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCTGTC CACATTGTCA CAAAAATGGA TCACGGGTTG TCGATAGTCG GCCAAGCGAA 
GACGGAAGCT TTATTCGTCG TCGTCGTGAG TGCATTCATT GTGGCTTTCG TTTTACAACC 
TTTGAACGGT ACGAGGAAAC GCCGCTACTA GTAATTAAAA AAGATGGCAC GCGCCAAGAA 
TTCAGTCGCC AAAAGATCCT CAATGGGATT GTGCGCTCGG CGGAAAAACG ACCGGTTAGT 
ATGGAGCGGT TGACCAAGAT TGCAGATAAA GTGGAAAAAC AAATCCGGAG TATTGGTGAA 
AGCGAAGTCT CCAGTCAAAT TATTGGTAAA TTTGTGATGA ACGAATTAAA AGGCGTCGAT 
GAGATTGCCT ATATTCGGTT TGCAAGTGTT TACCGCCAAT TTAAGGACGT TGATGCCTTT 
ATGAGCGAAC TTGAAACCAT GATGAAGGCA GAACATAAAA AATAA 

 

Protein sequence

MRCPHCHKNG SRVVDSRPSE DGSFIRRRRE CIHCGFRFTT FERYEETPLL VIKKDGTRQE 
FSRQKILNGI VRSAEKRPVS MERLTKIADK VEKQIRSIGE SEVSSQIIGK FVMNELKGVD 
EIAYIRFASV YRQFKDVDAF MSELETMMKA EHKK