| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1239 |
|---|
| Symbol | rplT |
|---|
| ID | 5188364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1286176 |
|---|
| End bp | 1286529 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640591079 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_001271833 |
|---|
| Protein GI | 148544463 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000443889 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTTA AAGGTGGAAC TGTTACGCGT GCACGTCGCA AGCGCATTAT GAAGTTAGCA
AAGGGTTACC GTGGTTCAAA GCACCGTCTT TTCAAGACTG CTAAAGACCA AGTAATGAAG
AGTTACGCTT ACGCTTTCCG TGATCGTAAG GTCAACAAGC GTAAGTTCCG TGAACTTTGG
ATTGCTCGGA TTAACGCTGC TGCACGTATG AACGACATTA GTTACAGCAA GTTAATGCAC
GGCTTAAAAG TTGCTAACAT TGACATTAAC CGTAAGATGT TAGCTGATTT AGCTGTTAAC
GATGCAGATG CATTCAAGGC ACTCGTTGAC GAAGCTAAGA AAGCTCTTAA CTAA
|
|---|
| Protein sequence | MRVKGGTVTR ARRKRIMKLA KGYRGSKHRL FKTAKDQVMK SYAYAFRDRK VNKRKFRELW
IARINAAARM NDISYSKLMH GLKVANIDIN RKMLADLAVN DADAFKALVD EAKKALN
|
|---|
| |