Gene Lreu_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1238 
Symbol 
ID5189301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1285492 
End bp1286022 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content38% 
IMG OID640591078 
ProductHAD family phosphatase 
Protein accessionYP_001271832 
Protein GI148544462 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000221013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGAGA TATTTAAACC AACATGGATG GTTAATACAA TATATTCTGT TTCTCCTGCC 
CAATTAAAAG AGCAGAGAGT GCGAGCTGTT TTTAGTGACC TAGATAATAC CTTGATTGCT 
TGGAACAATC CAGATGGAAC TCCAGAATTA AAGGAATGGA TGGATGCTTT ACAGGAAGCC 
CATATTCCAC TAATTGTTAT TTCTAATAAT AGTAAAGAAC GAGTTGGGAA AGCTGTTAAT 
AGCCTTGACC TTCCATTTGT TTCGCGATCA TTAAAGCCCT TAAGTTTTGG GATTGATCGT 
GCACGAAAAA AACTTAATTT AGCAAAAGAT GAAGTGGTTA TGGTTGGTGA CCAGTTATTG 
ACTGATGTTG CTGCGGCTAA CCAAGCGGGC ATTCGCAGCA TTTTAGTACG TCCGCTATTA 
AATACAGATA AGTGGGATAC CCGTATTAAC CGCTTCTTTG AACGTCGTGT TTGGAAGAGC 
TTAAACAAAA AATATCCAGA TTTAAAATGG CAGGAGGATT TGAATGACTG A
 
Protein sequence
MLEIFKPTWM VNTIYSVSPA QLKEQRVRAV FSDLDNTLIA WNNPDGTPEL KEWMDALQEA 
HIPLIVISNN SKERVGKAVN SLDLPFVSRS LKPLSFGIDR ARKKLNLAKD EVVMVGDQLL 
TDVAAANQAG IRSILVRPLL NTDKWDTRIN RFFERRVWKS LNKKYPDLKW QEDLND