Gene Lreu_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1237 
Symbol 
ID5189816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1284372 
End bp1285499 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content41% 
IMG OID640591077 
ProductGTP-binding protein YqeH 
Protein accessionYP_001271831 
Protein GI148544461 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03597] ribosome biogenesis GTPase YqeH 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000000896118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC AAGAACAACA AACTGAAGAA TTACGTTGTA TAGGTTGTGG GAGCATTATC 
CAAACGGAAG ATCCTAATGG CTTGGGTTAC ACGCCTAAGT CAGCCCTGGA GAAGGGAAAG 
GAGACAGGAG AATTATACTG TCAGCGTTGT TTCCGTTTGC GGCACTACAA TGAAATTGCT 
CCAGTGTCAT TAACGGATGA TGATTTTCTG CGCCTATTAA ATCAGATTCG GGATGCCAAT 
GCTTTAATTG TGTATGTTGT TGATGTTTTT GACTTTAATG GAAGCCTAAT TCCGGGCTTA 
CACCGTTTTG TTGGCGATAA TCCAGTATTA TTAGTTGGAA ATAAGGAAGA CTTGTTGCCA 
CGTTCTCTAC GGCGGCCAAA GTTAACTGAC TGGATTCGTC AACAGGCAAA TATTGCCGGA 
TTGCGTCCAA TTGATACGGT TCTTGTTTCA GCTAAAAAGA ACCATCAGAT TGACCACTTG 
CTTGATGTGA TTGAAAAATA TCGACACAAT CGAGACGTTT ATGTTGTTGG TGTTACCAAT 
GTTGGAAAAT CAACGTTAAT AAACCAAATT ATCAAGCAAC GAACGGGAGT AAAAGAATTG 
ATCACTACTT CACGCTTCCC AGGAACTACT CTTGATAAGA TTGAAATTCC GCTTGATGAT 
GGGCATGTTT TAGTTGATAC GCCTGGAATT ATCCATCAAG AACAAATGGC CCATGTCTTA 
TCGCCAAAAG ACTTGAAGAT TGTGGCACCC CAAAAAGAGA TTAAACCAAA GACTTACCAA 
TTAAATGATG GTCAAACATT ATTCTTAGGT GGCGTTGCGC GATTTGATTA TCTTCATGGT 
GAACGTGCGG GAATGGTTGC TTACTTTGAT AATAATTTAC CAATTCACCG TACAAAGCTA 
AACAATGCTG ATAATTTCTA TGCTAAACAC TTAGGAGATT TGCTTACCCC ACCGACTAGC 
GATGAAAAGA ATGAGTTCCC ACCATTAGAA CGTTATGAAT TCCACATTAC CGAAAAGAGC 
GATATTGTCT TTGAGGGTCT AGGATGGATT ACTGTTCCTG CAAAAACGAC TGTTGCTGCA 
TGGGTTCCGA AAGGTGTCGG GGCTCTGGTA CGGCGCGCAA TGATTTAA
 
Protein sequence
MTEQEQQTEE LRCIGCGSII QTEDPNGLGY TPKSALEKGK ETGELYCQRC FRLRHYNEIA 
PVSLTDDDFL RLLNQIRDAN ALIVYVVDVF DFNGSLIPGL HRFVGDNPVL LVGNKEDLLP 
RSLRRPKLTD WIRQQANIAG LRPIDTVLVS AKKNHQIDHL LDVIEKYRHN RDVYVVGVTN 
VGKSTLINQI IKQRTGVKEL ITTSRFPGTT LDKIEIPLDD GHVLVDTPGI IHQEQMAHVL 
SPKDLKIVAP QKEIKPKTYQ LNDGQTLFLG GVARFDYLHG ERAGMVAYFD NNLPIHRTKL 
NNADNFYAKH LGDLLTPPTS DEKNEFPPLE RYEFHITEKS DIVFEGLGWI TVPAKTTVAA 
WVPKGVGALV RRAMI