Gene Lreu_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1236 
Symbol 
ID5188344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1284037 
End bp1284348 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content37% 
IMG OID640591076 
Producthypothetical protein 
Protein accessionYP_001271830 
Protein GI148544460 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000939316 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAA GAGGAAAACA AAAACGATTT TTACGAGCAC AAGCAAACCA CCTTCAACCA 
CTATTTTCTG TAGGTAAAGA TGGTCTGACT GACAATTGGC TTGCTCAACT AGATGGTGCA
CTCGACCGTC GAGAATTAAT TAAGGTTAGC ATTTTGCAAA ACTCAGATGT TACAACTGAT
GAAGTTCGCG AATTAATTGA AGAAAAAACT TCTATTCAGG TAGTTCAAGT TATTGGTCGG
GTATTAGTTT TATTTAAAGT TTCAGCAAAT AAGGATGCCC GTGAATTGTC ATCACGAGTA
GCTGAAATCT AA
 
Protein sequence
MQLRGKQKRF LRAQANHLQP LFSVGKDGLT DNWLAQLDGA LDRRELIKVS ILQNSDVTTD 
EVRELIEEKT SIQVVQVIGR VLVLFKVSAN KDARELSSRV AEI