| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1234 |
|---|
| Symbol | |
|---|
| ID | 5189245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1282764 |
|---|
| End bp | 1283378 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640591074 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001271828 |
|---|
| Protein GI | 148544458 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000446214 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATGAAG AATTAGTTTA TAATAAAAAT TATATCCCAA TGACACGGTC TGAACTTATC
GACCGTCTCA AAAAGGCGTT AAAGGACAAA CGATTTCAGC ATGTGTTACG TGTGGAAGAG
ACAGCGATTA AGTTAGCTGA GCAATACGGG GTTGATGTTG AAAAAGCTAG TATTGCAGGC
CTGTGTCATG ATTATGCCAA ACAGCGTCCT GACGAAGATT TTATTGCTGA GATTAAGAAA
AAAGGGCTTA ATCCGCTGCT CTTAGATTAT GGTAATGCAA TTTGGCATGG AGTAGTTGGT
GCAGAGCTAA TTAAGGATGA ATTAGGGATT TGGGATGAAG ATATCCTAAA TGCGGTTCGC
CACCATACTA CTGGGGCGCC AGTAATGACA AAGCTTGAGC AGGTTATTTA CATGGCTGAT
TATATTGAGC CGGGTCGAGA CTTTGCAGGC GTAAAAAAGG CACGAGTAAT TACAGCCGCA
AACCTTCAAG CAGGGGTTGC TTACCAAACA AAACATACGC TGACTTATTT GATTGGAAAT
GGGAAGCCGG TATATCCAAA GACAATAGAT ACCTATAATG CATGGGTTCC ACAATATGAA
GGAGAGATAG ATTAA
|
|---|
| Protein sequence | MNEELVYNKN YIPMTRSELI DRLKKALKDK RFQHVLRVEE TAIKLAEQYG VDVEKASIAG
LCHDYAKQRP DEDFIAEIKK KGLNPLLLDY GNAIWHGVVG AELIKDELGI WDEDILNAVR
HHTTGAPVMT KLEQVIYMAD YIEPGRDFAG VKKARVITAA NLQAGVAYQT KHTLTYLIGN
GKPVYPKTID TYNAWVPQYE GEID
|
|---|
| |