Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1227 |
Symbol | |
ID | 5189681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1277203 |
End bp | 1278678 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591067 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001271821 |
Protein GI | 148544451 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0255402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAA AAGATGAAAG ACGGTTTGTT TCGCTAAAAA TTAAGTGGGC AGCTGGGACG GCATTAGGGT CATTAATCAT CTTTTGTATC GTTGCCATGG CATTGTTTAG TGCATTTACG CAAAATTTAT TTCATCAGGA AAGACAATTG TTGAATCAAG GGATGACCAA TATTAGTACA CAATTAAGTA CTGTTGATAA GCCCTTAACA AAAAAGAATG TTAGTCACCT TATTGATCCA GACAGAAACC GGTCGAATAT TATTTCTGGA GAGGAATATA AACGACCGGT AATTAAAGAA TTAAGTGATG GACACTTGGT TATTAACATT TATAATCCTG ATGGAAAGAA TATTTTGAGT ACAGGTCGTT ATATTAAAAA GCCACAGTTT ACGACTAATC GCAATATTCA TATTGCTGCT GGGCCTGATC ATGATGTGTT GGTCGGGCAG ATGCCAATTT ATGGTCAGAA TAATCGGCAG TTGATTGGAT ATTTACAAGT TGAAAATAAC CTTGATGCTT ATATGCAAAG TTATCATCAG TTAGCATTGG TGTGCATCTT GGCGCTCTGC CTGGTTGTGA TTGCGAGCGG CCTCTTGGGA TACTTTCTTT CACTTTTCCT CCTTCGACCA TTGGATGGAA TTCATGACAC GGTTAAGGAG ATTAGTGCAG ATCCGACTAA AGATGTCCGA GTACCAACTA CCAATCGTAA TGATGAACTA GCAGAACTGA TAACGATGTT TAATGAGATG CTTGATCGGA TGCAGCGGTA TATCGACCAG CAGTCACAAT TTGTCAGTGA TGTTAGCCAT GAACTGCGGA CACCCGTTGC GATTATTCAA GGACACTTGG AGATGCTGCA ACGTTGGGGC AAGGATGATC CGAAAGTGCT GGATGACTCA ATTAAAGCAA CATTAATTGA GACTCGCCGA ATGAAAAACC TGGTTCAAGA AATGCTTGAT TTGAGCCGAG CAGAGCAAGT GGAGATTAAC TTCCGCAATC AGCATACGAT TGTTAATGAT GTGGTTCATC AGGTCTACAA TAACTTTAAG ATGTTGTATC CGGACTTTAC TTTCCGTTTG GACGACGATC TGAAAGAGCC AATCATGGTT GATATTTATC GCGACCATCT TGAACAGGTA CTTGTAATTT TATGTGATAA TGCTGTCAAA TATTCCACCG ATGACCATAA AGAGATCCAT ATTATTCTTT CACGGGGAAT GAATACTGTT GAGATTGGTA TTCAGGACTT TGGTGAAGGG ATCTCACCAG AAAATGTAAA ACGGGTCTTT GATCGTTTCT ATCGAGTAGA TAAGGCGCGT AGTCGTAAGA AGGGCGGTAA TGGACTAGGC CTTTCAATTG CCAAGCGACT AATTGAAGGT TATCACGGTT CGATTACCCT AGAAAGTTCA GTCGGTGCTG GATCATTGTT TAGAATCATT TTACCGATTA TTGAAGATCC AGAGACAAAA AAATAA
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Protein sequence | MKQKDERRFV SLKIKWAAGT ALGSLIIFCI VAMALFSAFT QNLFHQERQL LNQGMTNIST QLSTVDKPLT KKNVSHLIDP DRNRSNIISG EEYKRPVIKE LSDGHLVINI YNPDGKNILS TGRYIKKPQF TTNRNIHIAA GPDHDVLVGQ MPIYGQNNRQ LIGYLQVENN LDAYMQSYHQ LALVCILALC LVVIASGLLG YFLSLFLLRP LDGIHDTVKE ISADPTKDVR VPTTNRNDEL AELITMFNEM LDRMQRYIDQ QSQFVSDVSH ELRTPVAIIQ GHLEMLQRWG KDDPKVLDDS IKATLIETRR MKNLVQEMLD LSRAEQVEIN FRNQHTIVND VVHQVYNNFK MLYPDFTFRL DDDLKEPIMV DIYRDHLEQV LVILCDNAVK YSTDDHKEIH IILSRGMNTV EIGIQDFGEG ISPENVKRVF DRFYRVDKAR SRKKGGNGLG LSIAKRLIEG YHGSITLESS VGAGSLFRII LPIIEDPETK K
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