Gene Lreu_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1227 
Symbol 
ID5189681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1277203 
End bp1278678 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content40% 
IMG OID640591067 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001271821 
Protein GI148544451 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0255402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAA AAGATGAAAG ACGGTTTGTT TCGCTAAAAA TTAAGTGGGC AGCTGGGACG 
GCATTAGGGT CATTAATCAT CTTTTGTATC GTTGCCATGG CATTGTTTAG TGCATTTACG
CAAAATTTAT TTCATCAGGA AAGACAATTG TTGAATCAAG GGATGACCAA TATTAGTACA
CAATTAAGTA CTGTTGATAA GCCCTTAACA AAAAAGAATG TTAGTCACCT TATTGATCCA
GACAGAAACC GGTCGAATAT TATTTCTGGA GAGGAATATA AACGACCGGT AATTAAAGAA
TTAAGTGATG GACACTTGGT TATTAACATT TATAATCCTG ATGGAAAGAA TATTTTGAGT
ACAGGTCGTT ATATTAAAAA GCCACAGTTT ACGACTAATC GCAATATTCA TATTGCTGCT
GGGCCTGATC ATGATGTGTT GGTCGGGCAG ATGCCAATTT ATGGTCAGAA TAATCGGCAG
TTGATTGGAT ATTTACAAGT TGAAAATAAC CTTGATGCTT ATATGCAAAG TTATCATCAG
TTAGCATTGG TGTGCATCTT GGCGCTCTGC CTGGTTGTGA TTGCGAGCGG CCTCTTGGGA
TACTTTCTTT CACTTTTCCT CCTTCGACCA TTGGATGGAA TTCATGACAC GGTTAAGGAG
ATTAGTGCAG ATCCGACTAA AGATGTCCGA GTACCAACTA CCAATCGTAA TGATGAACTA
GCAGAACTGA TAACGATGTT TAATGAGATG CTTGATCGGA TGCAGCGGTA TATCGACCAG
CAGTCACAAT TTGTCAGTGA TGTTAGCCAT GAACTGCGGA CACCCGTTGC GATTATTCAA
GGACACTTGG AGATGCTGCA ACGTTGGGGC AAGGATGATC CGAAAGTGCT GGATGACTCA
ATTAAAGCAA CATTAATTGA GACTCGCCGA ATGAAAAACC TGGTTCAAGA AATGCTTGAT
TTGAGCCGAG CAGAGCAAGT GGAGATTAAC TTCCGCAATC AGCATACGAT TGTTAATGAT
GTGGTTCATC AGGTCTACAA TAACTTTAAG ATGTTGTATC CGGACTTTAC TTTCCGTTTG
GACGACGATC TGAAAGAGCC AATCATGGTT GATATTTATC GCGACCATCT TGAACAGGTA
CTTGTAATTT TATGTGATAA TGCTGTCAAA TATTCCACCG ATGACCATAA AGAGATCCAT
ATTATTCTTT CACGGGGAAT GAATACTGTT GAGATTGGTA TTCAGGACTT TGGTGAAGGG
ATCTCACCAG AAAATGTAAA ACGGGTCTTT GATCGTTTCT ATCGAGTAGA TAAGGCGCGT
AGTCGTAAGA AGGGCGGTAA TGGACTAGGC CTTTCAATTG CCAAGCGACT AATTGAAGGT
TATCACGGTT CGATTACCCT AGAAAGTTCA GTCGGTGCTG GATCATTGTT TAGAATCATT
TTACCGATTA TTGAAGATCC AGAGACAAAA AAATAA
 
Protein sequence
MKQKDERRFV SLKIKWAAGT ALGSLIIFCI VAMALFSAFT QNLFHQERQL LNQGMTNIST 
QLSTVDKPLT KKNVSHLIDP DRNRSNIISG EEYKRPVIKE LSDGHLVINI YNPDGKNILS
TGRYIKKPQF TTNRNIHIAA GPDHDVLVGQ MPIYGQNNRQ LIGYLQVENN LDAYMQSYHQ
LALVCILALC LVVIASGLLG YFLSLFLLRP LDGIHDTVKE ISADPTKDVR VPTTNRNDEL
AELITMFNEM LDRMQRYIDQ QSQFVSDVSH ELRTPVAIIQ GHLEMLQRWG KDDPKVLDDS
IKATLIETRR MKNLVQEMLD LSRAEQVEIN FRNQHTIVND VVHQVYNNFK MLYPDFTFRL
DDDLKEPIMV DIYRDHLEQV LVILCDNAVK YSTDDHKEIH IILSRGMNTV EIGIQDFGEG
ISPENVKRVF DRFYRVDKAR SRKKGGNGLG LSIAKRLIEG YHGSITLESS VGAGSLFRII
LPIIEDPETK K