Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1226 |
Symbol | |
ID | 5189623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1275521 |
End bp | 1277014 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640591066 |
Product | amino acid permease-associated region |
Protein accession | YP_001271820 |
Protein GI | 148544450 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGCGA AAGAGCAGAA AAAATTAATC ACAACGCCAA CATTGGTGTT AATGATTATT TCGACAATAT ATGGGTTTGG TAATGTTTCA ATAGCTTATG ATCAAATGGC ATATGCGGGG ATGTTTTGGT ATATCCTTGC TGGAGTTTGT TTCTTCTTCC CTTGTTGTTT GATGATGGCT GAATATGGCT CGGCGTTTAA GGATGCCCAA GGAGGAATTT ATTCGTGGTT AGCTGGTTCG ATCGGGGAAC GGCTGGCCTT TATCGGAACC TTTATTTGGT TAGCGAGTTG GGTTCTGTGG CTAGTATCAA GTGCATCTCG ACTTTGGATA ACATTGTCGG CACTATTATT TGGCCATGAT ACTACCCAAC AATGGCACTT TTGGATTTTT AATTCTAATC AGTTAATTGG TATCTTGGCA ATTCTGTTCG TTTTACTGGT GACTTTGCTG AGTTCACAGG GAATTAATGG GATTACGAAA ATCAGCTCGT TTGGTGGGGC GTTTATGATT GGAATGAATG CCATTTTTAT TATTGCAAGT TTAGTGACGA TTATTGCTAA CAAGGGGGTT ACCGCCCAGC CTATTCATGG TATTAGCAGT TTTATCGAAT CGCCTAATCC TGCTTTTAAG ACGCCAATTG CGATTATCTC ATTCGTTGTT TACGCAATTT TTGCATATGG TGGAATGGAA AATCTTGGTG GGGTTACTGA TAGTATGAAG AATCCAGCGA AGACATTTCC AAGAGGCTTA GTTATTGGTT CGCTCTTAAC GATTGGCAGT TACGTATTAA TGATCTTGAT GACTGGCTTT AGCGTTAATT ACAATCATGT TATTGCAAAA TCAAGCGTTA ACTTAGGTAA TGTTACTTAC GTTGTCTTTA ACCAATTAGG ATACCAACTA GGTGTTTCGC TAGGGTTAAG TCATGCTACT AATATTTTTC TTGGTGTTCT CTTTACGCGA ATGATTGCGT TAGCTGGGCT GATGGGGATG TTAGGAGCAA TGTTCCTGTT AGTTTACTCC CCGATTAAGT CCTTTATCAT GGGAGCTAAT CCTGAGTTAT GGCCTAAAAA GATTGTGACA CTGAACAAAC ACGGGATGCC AGCATATGCA ATGTGGATTC AGGCAATTTT TGTTTCGTGT ATTATTTTCT TAGTTGCATT TGGGGGTTCA GCAGCTGCTA GTTTTTACCA AATCTTGACA GATATGGTTA ATGTTTCAAC CTGTGCCCCT TATATCTTCC TTGTTGGTGC ATTCCCATTC TTTCAAAAGA AGGATATTCC ACATGATTTT GTGGTATTTA AGAATCATTT TTGGACAAAT GTATTAGTTA TCTTTGTTGA AATAATTGTT TGCCTAGGAA TCATCTTTAC GTGTATCCAA CCGATTATTG AGCATGATTT TCAAACTGCA TTCTGGACAG CATTTGGTCC GGTTTTCTTT GGAATTGTTG CTTGGATTTT CTACAATCAC GCATCAAAGA AAATTACAAA GTAG
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Protein sequence | MAAKEQKKLI TTPTLVLMII STIYGFGNVS IAYDQMAYAG MFWYILAGVC FFFPCCLMMA EYGSAFKDAQ GGIYSWLAGS IGERLAFIGT FIWLASWVLW LVSSASRLWI TLSALLFGHD TTQQWHFWIF NSNQLIGILA ILFVLLVTLL SSQGINGITK ISSFGGAFMI GMNAIFIIAS LVTIIANKGV TAQPIHGISS FIESPNPAFK TPIAIISFVV YAIFAYGGME NLGGVTDSMK NPAKTFPRGL VIGSLLTIGS YVLMILMTGF SVNYNHVIAK SSVNLGNVTY VVFNQLGYQL GVSLGLSHAT NIFLGVLFTR MIALAGLMGM LGAMFLLVYS PIKSFIMGAN PELWPKKIVT LNKHGMPAYA MWIQAIFVSC IIFLVAFGGS AAASFYQILT DMVNVSTCAP YIFLVGAFPF FQKKDIPHDF VVFKNHFWTN VLVIFVEIIV CLGIIFTCIQ PIIEHDFQTA FWTAFGPVFF GIVAWIFYNH ASKKITK
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