Gene Lreu_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1193 
Symbol 
ID5189083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1243208 
End bp1243840 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content36% 
IMG OID640591032 
ProductTetR family transcriptional regulator 
Protein accessionYP_001271787 
Protein GI148544417 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000366279 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTA ATAAGACAGA CCCGCGTGTA ATTAAAACAC GTAATAGTCT GCGCAAAGCT 
CTTGTATATC TGATGAGACG TGAAAAGCTT GAAGATATTA GCGTCCAAAA GATTACTGAA 
ACTGCCAACA TCACCCGAGG AACTTTCTAT CTTCACTATA AGGATAAACA AGATTTTATT 
CAGTCAGCAA TCCAAGAGAT TATTGACGAT TTCTTCAACC AAGTAATGAT CGATAGTAAT 
TTTTCGAAAG AACGGACGGT AAAGGTGTTT TCACTCCGCA AAGCATTTCA GTATATCGAA 
AATAACGCCG ATATTTTTGA TGTTCTATTA AATAATGAAA AGAATAACTT CTTTTATGAA 
CAACTCTACA ATCGGTTAGC AAATGAGATG ACACACTTTA ATGAGCAAGT GAATAAGAAC 
CAACAGTTGA AAGTCCCGCT TAATTTGCAG ATTTCCTTTA TTGACTCAGC ATTTCTTGGC 
CTAGTAAGTC GATGGCTAGA AGATGGCATG ATTTATACTC CACGTTACAT GACACAAAGC 
GTGGCAAAGA TGTTGGATCA GTTTAGTAGC GAGAATGTTT CTTTGGTTAA TTTTTTTGAT 
GGTGAATTAG AAGGAACTTT AGAAAAGATT TAA
 
Protein sequence
MAANKTDPRV IKTRNSLRKA LVYLMRREKL EDISVQKITE TANITRGTFY LHYKDKQDFI 
QSAIQEIIDD FFNQVMIDSN FSKERTVKVF SLRKAFQYIE NNADIFDVLL NNEKNNFFYE 
QLYNRLANEM THFNEQVNKN QQLKVPLNLQ ISFIDSAFLG LVSRWLEDGM IYTPRYMTQS 
VAKMLDQFSS ENVSLVNFFD GELEGTLEKI