| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1183 |
|---|
| Symbol | xseA |
|---|
| ID | 5188237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1236177 |
|---|
| End bp | 1237514 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591022 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_001271777 |
|---|
| Protein GI | 148544407 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0612657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAA GCCAGTATTT AACAGTTAGT GAATTAACTA AGTATTTGAA AATGAAGTTT
GACCGGGATC CATACCTACA TACGGTTTAT TTAACCGGTG AGCTTTCTAA TTTTCGTTTA
CGGCAAAAGC ATCAGTATTT TAGTTTAAAA GACGATAATG CTGTGATCGA TGCTGTAATG
TTTGAGCATC AATTCCGGAA AATTAAATTT ACTCCTGAAC AGGGGATGAA AGTTTGTGTA
GTCGGTCATG TAAGCTTGTA TGAAAAAAGT GGTCGCTACC AGATTTATAT TGATCGGATG
GAGCCAGATG GTCTGGGCTC TTTATACTTA GCGTTTGAAC AACTAAAAAA GAAATTGAGC
GCTGAAGGTC TATTTAATTT ACCTAAAAAA CAGATCCCAA TGTTTCCAAA ACGAATTGCA
GTTGTTACTA GTATTGATGG GGCAGTTATC CGGGATATTA ATACGACTGT TCGACGCCGT
TATCCAATTG CTCAAGTTGT TCTATATCCT ACTGTTGTTC AAGGAGATAA GGCAGCGGCG
GATATTGCTA GACAAATTAA CCGTGCCAAT GACCGCGGCG ACTTTGATAC CCTTATTATC
GGTCGAGGTG GGGGATCAAT GGAAGACTTA TGGCCTTTTA ATGAAGAAGT AGTTGCCCGT
GCAATTGCCA ATAGCAAAAT TCCGGTAATT TCATCAGTTG GTCACGAGAC AGATACAACA
ATTGCCGACC TCGTAGCTGA TCAACGCGCA GCAACCCCAA CTGCTGCTGC TGAATTAGCA
ACGCCGGTAA AACTAAACGA TGCATTAATG ACACTTAAAG ATGATCAGAA TCGTTTATTA
AATACGATGC GGACTAAAAT TAATTTTGAC CGCCAACAAT TGAATAAACA GCTGCAAAGC
TATATTTTTC AGCAACCGAC AAGATTATAT GAAAATTATG CGCAAAAGGT TGACCAATTA
ACTCAACAGT TAGGTCAAGC AGCGCAAAAT AAAATGCAAG AGCTACAAAT GAACGTGGAA
AGATTAAGTG GGCGTTTAAC GGCGGCTTCT CCACTGCATC GGGTTCAACA ACAAGAACAG
TTAGTTGATC AATTAAAAAA ACAATTGGTT ACAGCCTCAC TTGCCAGCCA AAATGAAAAG
AAACAACAAG TGACAACTCT TATTAAACAA TTAGATTCAC TGAGTCCCCT TAAAATTATG
AGTCGGGGAT ATACGTATGT AACGAGTGAT GAAAAGGTTG TTAATCATGC CAGTCAATTA
ACGGTTGGGC AAAATGTTCA CCTGCATTTT GATGACGGGG AAGTTCAAGC AGAAATAAAA
AAGGTAAAGG AGCACTAA
|
|---|
| Protein sequence | MDRSQYLTVS ELTKYLKMKF DRDPYLHTVY LTGELSNFRL RQKHQYFSLK DDNAVIDAVM
FEHQFRKIKF TPEQGMKVCV VGHVSLYEKS GRYQIYIDRM EPDGLGSLYL AFEQLKKKLS
AEGLFNLPKK QIPMFPKRIA VVTSIDGAVI RDINTTVRRR YPIAQVVLYP TVVQGDKAAA
DIARQINRAN DRGDFDTLII GRGGGSMEDL WPFNEEVVAR AIANSKIPVI SSVGHETDTT
IADLVADQRA ATPTAAAELA TPVKLNDALM TLKDDQNRLL NTMRTKINFD RQQLNKQLQS
YIFQQPTRLY ENYAQKVDQL TQQLGQAAQN KMQELQMNVE RLSGRLTAAS PLHRVQQQEQ
LVDQLKKQLV TASLASQNEK KQQVTTLIKQ LDSLSPLKIM SRGYTYVTSD EKVVNHASQL
TVGQNVHLHF DDGEVQAEIK KVKEH
|
|---|
| |