| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1173 |
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| Symbol | |
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| ID | 5188185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1226656 |
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| End bp | 1229085 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591012 |
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| Product | replication restart DNA helicase PriA |
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| Protein accession | YP_001271767 |
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| Protein GI | 148544397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAGT TGGCACAGGT AGTTGTTGAC GTTCCAACAA TGCAAACAAA CCAACCATAT
ACTTATCAGA TTCCGCCAAA GCTTGAAAAA CAAATCCAGG TCGGGGTAAG AGTGATTGTG
CCTTTTGGAA AGGGAAAACG GACTGTTCAA GGATTCGTTG TTGCCCTTGA CAATGCATCC
CAATATGAGG GAGAACTTAA ACCAATTCAG GCGATAATGG ATCTTCAACC GGTAATTAAT
CCTGAATTAA TGAATCTTAG CAAATGGTTG GCTGATACTA CTTATTCTTT TTGGATTTCT
TGCTTATATA CGATGTTGCC TAACTTATTG AAGGCTAAGA CTACCAGAAT TATTCGAATT
ATAGATGAAG TAGACGAACA TGTTGCCTTT GATATTTTTC ATGGTCGAGA TGAATTAGAG
ATGGCGGCGG TACAAGATAA ACCGGCAATT TTAAGTGAAT TGTTCAAACT GCAAAAGGAA
GGAAAGATAG CGATTGAATA CCAAGTGGAA GACCGGGCCA AGGCTAAAAC GGTGACTGGT
ATTCGCTCTT TACTTAACTT TGAACAACTG GAAGATGAGC GCGCATCCCT TCATGCCAAT
GCGCATGCTC AAAACCGCCT TCTTTCATAT TTACAATCAA TTGGCAGTCA AGTTGTTAAG
CAAAAGGATG CTGAACATAA AACTGGTTTA AAAGCAGCCA CCTTCAATCA GGGACAACAG
AAGGGATGGT TAGAGAAAAC ACCAGTTGAA GTATATCGAC AACCCTTGGC TATGCAGGTC
ACTCCTGATG ATGCTCATTT AGCAGCCCCC CTGCAGCTCA ACGCCGATCA ACAAAATGCC
GTTAACCAGA TTAATCAAGC AATCGACAAT CATGACCCTA AAGTTTTCCT CTTACAAGGA
GTTACGGGGA GTGGCAAGAC AGAAGTATAC TTGCAATCGA TTGCTAATGC TCTTCAACAG
GGAAAGACAG CATTAATGCT TGTACCTGAG ATTTCATTAA CTCCCCAGAT TGTTAACCGT
GTGCGGCGAC GATTTGGTTC CAAGGTTGCT GTTTTACATA GTAGTTTATC AAACGGGGAA
CGGTATGATG AATGGCGGCG GATTGAGCGA GGAGAAGCGC AAGTAGTTGT GGGTGCCCGT
TCAGCAGTCT TTGCTCCATT GACCAATTTA GGGCTAATCA TTCTTGATGA AGAGCATGAA
TCTAGTTATA AACAAGATGA ATCACCCCGT TATCAAGCGC GTGAAGTAGC TAAATGGCGG
GGGAAATATA ATCAAGCGCC TGTAGTCCTT GGTTCTGCTA CTCCTAGTCT GGAGAGTCGT
GCGCGAGCAG TAAAAAACGT TTATCACTTG TTGCGTCTTC CGCACCGGGT AAATAAACAG
GAATTGCCGC CAATTGAAGT GGTTGATATG CGGGATGAAA TTAAAAAATA CGGGGAGAGT
AACTTTTCGC AGAAACTATT AACCGACTTA AATGACCGCC TGCAAAAGAA CGAACAAAGT
ATTTTAATGC TAAATCGACG GGGATTTTCG TCCTTTATGA TGTGTCGTGA TTGTGGAAAT
GTCTTAAAGT GTCCGAATTG TGATATTTCT TTGACACTTC ACATGGATAC GCGGACAATG
AAATGTCACT ATTGTGGTCA TGAAGAACCA ATCCCCCGTG AATGTCCCAA TTGCCATAGC
CATCAGATTC GCTACTATGG GACCGGAACA GAGAAAGTTG AGCAAGAATT GCATCAATTA
TTACCCCAAG CCCGGATTAT TCGCATGGAT GTTGATACCA CTCGGCGGAA GGGAATGCAT
GCAAAATTAT TGCGACAGTT CGGTCAACAC CAAGCGGATA TTTTATTAGG AACCCAGATG
ATTGCAAAGG GGCTTGATTT CCCTAATGTT ACCTTAGTAG GAGTCTTAAA TGCTGATACT
GGTCTAGGCT TACCAGATTT TCGTGCTAGT GAACGGACTT TTGATTTGCT AAGTCAAGTT
AGTGGTCGGG CTGGTCGGGC AAATAAGCAA GGAAAAGTTA TTATCCAGAC ATATAACCCC
GATCATTACG CTATTCAAGA TGCCAAAACA CATGATTACG AAAAATTCTT TAACCAGGAA
ATGATGCTGC GAAGACAAGC CAGTTATCCG CCATACTATT ACACCGTTCG TTTGATGGCT
AGTCATCCTG AAGAAGCCAA AGCAGCTCGG GCAATGGCAG ATATTTATGG CCGCCTAAAG
CAGGGATTAT TATCTTCGAC GGTTATTCTT GGCCCCACCC CGCGAGCGAT TGCCCGAATG
AAGCGTCGTT ACTATTACCA AATTGTCATC AAATATAAGA AGGATCCGTA TTTGCATCAG
CTATTGTTTG ATATTCTTCA GGATACGCAA AGTCGCGGTT TTAAGGATGT CCAAGTAAGC
ATCGATCCAG ATCCACAGTA TTTTATGTAA
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| Protein sequence | MPELAQVVVD VPTMQTNQPY TYQIPPKLEK QIQVGVRVIV PFGKGKRTVQ GFVVALDNAS
QYEGELKPIQ AIMDLQPVIN PELMNLSKWL ADTTYSFWIS CLYTMLPNLL KAKTTRIIRI
IDEVDEHVAF DIFHGRDELE MAAVQDKPAI LSELFKLQKE GKIAIEYQVE DRAKAKTVTG
IRSLLNFEQL EDERASLHAN AHAQNRLLSY LQSIGSQVVK QKDAEHKTGL KAATFNQGQQ
KGWLEKTPVE VYRQPLAMQV TPDDAHLAAP LQLNADQQNA VNQINQAIDN HDPKVFLLQG
VTGSGKTEVY LQSIANALQQ GKTALMLVPE ISLTPQIVNR VRRRFGSKVA VLHSSLSNGE
RYDEWRRIER GEAQVVVGAR SAVFAPLTNL GLIILDEEHE SSYKQDESPR YQAREVAKWR
GKYNQAPVVL GSATPSLESR ARAVKNVYHL LRLPHRVNKQ ELPPIEVVDM RDEIKKYGES
NFSQKLLTDL NDRLQKNEQS ILMLNRRGFS SFMMCRDCGN VLKCPNCDIS LTLHMDTRTM
KCHYCGHEEP IPRECPNCHS HQIRYYGTGT EKVEQELHQL LPQARIIRMD VDTTRRKGMH
AKLLRQFGQH QADILLGTQM IAKGLDFPNV TLVGVLNADT GLGLPDFRAS ERTFDLLSQV
SGRAGRANKQ GKVIIQTYNP DHYAIQDAKT HDYEKFFNQE MMLRRQASYP PYYYTVRLMA
SHPEEAKAAR AMADIYGRLK QGLLSSTVIL GPTPRAIARM KRRYYYQIVI KYKKDPYLHQ
LLFDILQDTQ SRGFKDVQVS IDPDPQYFM
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