Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1170 |
Symbol | |
ID | 5188318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1223598 |
End bp | 1224338 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591009 |
Product | protein phosphatase 2C-like protein |
Protein accession | YP_001271764 |
Protein GI | 148544394 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.325557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTG CTTATCAAAC AGATATCGGC CACCAACGAA AGCAAAATCA AGACCGGGTT GCTGTGTTTA CTAACAAGCT AGGCAATCAA TTAATGGTTA TTGCTGATGG AATTGGCGGC AATCGTAGCG GAGATATCGC TGCAGAGCAA ACAGTTGCGA CTTTGGGGAG TCAGTTTAAA AAACGGCCCC CGCAGACATC AATGGAGGGG ATCCGTTGGT TTGCTCGTGA AACCCAATTA ATCAATAATA AAATCTTAGC GCAATCCAAA CGTAATCTTC GCTTGCAGGG GATGGGAACA ACAATGGTCG CCACTATTAC ATTTAAGGAT GCGGTTGTGG TTGCTAATAT TGGTGATAGT CGAGGATATA TCCTTCATCA AAACCTATTA ACGCAGATTA CAGTAGACCA TTCATTGGTT AATGAATTGG TAAAAACGGG AGATATATCA GAAGATGAAG CACTAAAGCT ACCCCAGAGC AATATAATTA CAAGGGCAAT TGGAATCTCT CCTGATGCAC AAGTTGATGT AAACCGCTTT GAATTAAACG AGGGTGATCA ACTGTTAATG TGTTCTGATG GCTTGTTTAA GACTGTTTCT AAGGAGCAGA TTATCAAGGT GCTTGAATTG CCGATACCGC TTGAAGAGAA ATGTGCTCAA CTTATAAAAA TGGCAAATGA TGCCGGCGGA CCAGATAATA TTACCGTTTT AATTGGGATT AATAGTAACC AGGAGGGATA G
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Protein sequence | MKAAYQTDIG HQRKQNQDRV AVFTNKLGNQ LMVIADGIGG NRSGDIAAEQ TVATLGSQFK KRPPQTSMEG IRWFARETQL INNKILAQSK RNLRLQGMGT TMVATITFKD AVVVANIGDS RGYILHQNLL TQITVDHSLV NELVKTGDIS EDEALKLPQS NIITRAIGIS PDAQVDVNRF ELNEGDQLLM CSDGLFKTVS KEQIIKVLEL PIPLEEKCAQ LIKMANDAGG PDNITVLIGI NSNQEG
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