Gene Lreu_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1167 
Symbol 
ID5188234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1220123 
End bp1220776 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content40% 
IMG OID640591006 
Productribulose-5-phosphate 3-epimerase 
Protein accessionYP_001271761 
Protein GI148544391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000000257786 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG TTGCACCATC AATTTTAAGT GCAGATTATG TAAATTTACA AAAGGACATT 
GAAAAGGTAG AAAAGGCCGG TGCACCATAC TTACACATTG ATGTTATGGA TGGTACCTTT 
GTTCCAAGTA TTTCTTATGG ACCAGGCTTT GTTAAGGCCA TTCGTCCAAT TACAAACATG 
GTATTGGATG TGCACTTGAT GGTTGAAAGT CCAGAACACA TTTTGCCAAT GTTCATTGAT 
GCTGGCGCTG ATATTATTGG TGTTCAAGTA GAAGCTACTC AACACATTCA CCGTGCTCTT 
CAAATTATCA AAAACGGTGG CGTAAAAGCC GAAGTTGTTA TTAACCCGGG TACACCAGTT 
GCGATGATTG AACCGGTATT ACACATGGTT GATCAAGTCT TAGTAATGAC GGTTAACCCT 
GGTTTTGGTG GTCAAAAGTT CTTGCCAGAA ACTGTTGACA AGATTGCCCA ATTAAACGCA 
ATTAAGGAAG AAAAGGGCTA CAATTTCGAT ATTGAAGTAG ACGGTGGAGT TAACGACAAG 
ACGGTTGTAG ATTGCTACAA AGCTGGTGCT ACGGTAGCAG TTGCTGGTTC ATATGTCTTT 
AACGCTGAAG ATCCTTCTGA ACGAATCAAG GCTCTTGAAG ATGCTACTAA GTAA
 
Protein sequence
MIKVAPSILS ADYVNLQKDI EKVEKAGAPY LHIDVMDGTF VPSISYGPGF VKAIRPITNM 
VLDVHLMVES PEHILPMFID AGADIIGVQV EATQHIHRAL QIIKNGGVKA EVVINPGTPV 
AMIEPVLHMV DQVLVMTVNP GFGGQKFLPE TVDKIAQLNA IKEEKGYNFD IEVDGGVNDK 
TVVDCYKAGA TVAVAGSYVF NAEDPSERIK ALEDATK