| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1158 |
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| Symbol | |
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| ID | 5188440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1208823 |
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| End bp | 1212386 |
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| Gene Length | 3564 bp |
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| Protein Length | 1187 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590997 |
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| Product | condensin subunit Smc |
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| Protein accession | YP_001271752 |
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| Protein GI | 148544382 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type
[TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00321236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAT TGTCTTTAAC TTTGGACGGC TTTAAGTCCT TTGCCCAAAA AACAACAATT
AAATTTGAGC CCGGGATGAC AGGGATTGTT GGCCCGAATG GTAGTGGAAA GAGTAATATT
ATCGAAGCTA TCCAATGGGT AATGGGCGAA CAGTCGGCTC ATCATTTGCG GGGAGATCGG
ATGGCTGATG TTATCTTTAA TGGGTCATCA GATCGTAAAC CTTTAAACCG GGCCCTAGTT
TCGATTACGC TAGATAATAG TGATCATTAC TTAGCTAGTG AATTTACTGA GCTTACCATT
ACTCGTAAAA TATATCGCAA TGGTGATAGT GAGTACTTAA TTAACGACCA AAACGTTCGC
TTAAAGGACA TTACAGACTT ATTTATTGAT TCTGGTTTAG GTCGAGAATC CTTTTCCATT
ATTTCCCAGG GACGGATTGA AGAGATCTTT AATGGTAAAC CAATTGATCG GCGGGGAATT
ATTGAAACCG TTGCGGGAGT TGCTAAGTAT AAGAAGAACA AAGAAACAGC TGAAAAGCGA
CTTACTACGA CAATGGAAAA CCTTAACCGG GTAAATGACA TTATTAGTGA GTTAGAAAAG
CAGATTGAAC CTTTAGAAGA ACAAAGTGCA ATTGCCCAAG ATTACTTGGA ACAAAAGAAA
CAATTTGATG TGCTTGATCG GACACAAACA GTTCGTCATT ATGATGAGTA CTATGGAAAG
TTAACTAAAT TAGGTGCCAA GCTCAAACAA GCAGAAGAGA TGGTGAAGGA CTATCAAAGA
CAAGCAGGCC ATGATCGGCA ACAACTTGAT AATTTAAAGC AAAAGCGCCA ACAACTAAAC
GCAACTAAGG ATCGACTTCA AGCAATCATC TTAAACCAAA CGGAGGCAAT TGCTAAGTAC
GAAAATCAGC AATCTGTTTC CAGTGTTCGC CGCGAGCAGC GTGAAAATGA GCAGCGACGG
TTAACTGCCC AACAGGCTGA ACTCAATGCA CGCTTAAAAG AGGTTAAGGC AAGCCAACGG
GCAAATGACG AGCAATTGGC TGAACAAAAA GCGCTGATTA ATAGTCAGCA AGCTGAGTTC
GAAGCAGCCA GAAAGATGAG TAGCAGTGAG CGGATCGCGA CCCTAAAACA GCAAGTAGAG
GATTTACGTA ACCAACAAGT TAGCTTGATG CAGGAAAGAA CAACGATTCA CAATCAGCAA
TCTTTCTTGT CACGTAATCA TGAACAGGCG ATGAGTCTTC AACGACAAAA TGTCGAGGAA
CTTGACGCTA CTAAGAATCA ACTTGCAGAA ATTAATCAGG AATTCGACCG CTACCAACAA
GCAGTGGCTA TTACTAAGGA AAGTCTGCAG AATGTCAGTG AAAAACTAAA GGCGGCTCAA
GATCACCGTG AAAAACTTAA TTACGGGTAT CAAACAAAAC AACGTGATTG GTATGCAGCA
TTAGGAGATG TGCGGTCACT TAAGTCGCGA ATTAATGCTT ACCAGTCAAT GGCCGATGAA
TATAGCGGCT ATTATCGGGG CGTTCAAGAG GTTCTTCGGC AACGGCAGCA ATTTCCTGGA
TTGGCGGGAG CAGTCAGCGA ATTATTTGAT GTTCCTGCCA AGTACACGCA AGCGATTGAA
ACAGTATTAG GAAGTCAGCT TCAGCAATTA GTTGTTGATC GGCAAGCTAC TGCCAAAGCA
ATTATTAACT TCTTGATTAA GACGCGCGCT GGCCGGGTCA CTATTCTGCC GCTTGATACG
CTTAGTCACC GGCGACCATT AAGTATTTGG CCGCAATTAA CTGGCCTTCC TGGTTTTTTG
GGTCGTGCAA CAGAACTTAT TAAGTTTGAT CAAAAGTTTC AGCTTATTGC TGACCACTTA
CTAGGAACAA CGGTTATTGC TGACAACCTT GATCATGCAA CTGAGATTGC CCGTGCAGGT
CGTCATATGG TACGGGTGGT AACCCTTGAC GGTCAGTTGA TCAATGCTAG TGGAGCAATG
ACTGGGGGAG CCACCCGTAG CCAACGGACA GGACTCTTAA GTCAAAAGCA AATGGCTAAA
CAACTAGAAG AGGAGCTAAA AAAACAGGAA CAGCTTGCAG CAAACTTAGA GCAAGAAGTT
GCTAAACTAC AACAAGCGCA AAAGGCGAAC GAACAAGTAG TAGCTGATTA TCAGCAACAA
GTTCAGACTT TACAAGATAA GTTTCATGAG CAAGAAAGTA GTTGTCAGTT GATCTCAAGT
AAGTATGAGA CGCTTACTAA TCGGGTACAG ATTTTAGAAA CCCAAAATAA ACAGCAAGAC
ACTCAACATC AGGATTACGA ATCACAAGTT CAACAAAATA ATGAACAAGC TGATAAAGTA
AACCAGGAAT TGACGCAAGT TGTGGCAAAG ATTAAGCAAA TCCTTACTCA GATTGATGAA
TTACAGAATG ATGAGTCGAC TCAGGCACGA CAATTGGCGC AAATGCAACA AAAAATCGCG
GTAGCGGAAG AACGACTTCA ACAATATCAA CGCCAAAGTC AAGAGTATAA CCGGCAACGG
CGAGAAGTTG AAGAGAGTTT AGAAAAGGTC ACGATTGCAA TCGCTGAATT AACGACTCAA
TCAGCTAGTC AATCAACAAG TGAACAATCG ACACAGACAG CCTTAAAAGA TGCTAAAGAA
GAGCAGGCAA AAGCTAAGGT GCAACTGGAA GATAATTCAG TTGCTCTTGA AGAACTTGAG
CAAAAGCTGT CACAAGCCGA AGCACATTAT AATCGTCTGC AAGAACTTCA GCGGGCAGCC
CTAGATGATC GTAATAACTT AAATGAAGAG CGCGTGAAGT ATGAATCCAT GGTTGACCAA
GCTCTTAATC GATTATCTGA GCAATATTCC ATGACCATTG ATGAAGCTCG TCAGCAGATG
AGTAAATTGG ATGAAGAGAC CTTGGCGACC CGGTTGAAGC TATTAAAGCG GGGATTAGAT
GATCTTGGTC AAGTTAATGT GGGAGCGATT GAAGAATATG AGCGCGTTCG TGAACGGTAC
GATTTCTTAA AGGGCCAACA AGACGACTTG CTCGCCTCTC GAGCTCAGCT TAATCAAACG
ATGGGTGAGA TAGATGCCCA AGTCAAGAAA CGGTTTATTA CAACCTTTAA TCAGGTTTCA
CAAAAGTTTG ATGAGACGTT CCAACAAATT TTCTCTGGTG GTCATGCTAA ACTTGTCTTA
ACCGATCCCC ATGACTTATT AACAACCGGG GTCGATATTA TGGCCCAGCC ACCAGGAAAG
AAAAATCAAC ATCTTTCATT GTTATCAGGT GGGGAACGAG CATTAACGGC GATTACCTTA
CTATTCGCTA TTTTGAAAGT CCGCCCAGTT CCATTTGCAA TTCTTGATGA ACCAGAGGCC
GCCTTGGATG AGGTTAATGT ACAACGTTTT GCGCACTACC TCAGCAAATT TGGTACTGAA
GGTCCACAAT TTATTGTCAT TACCCACCGC AAGGGAACGA TGATGGACGC CGATGTATTG
TACGGGGTTA CAATGCAAGA ATCAGGAGTT TCAAAGATGG TATCAGTGGA CGTTGTTGAT
ACTTTACAAG AGAGTGATAA TTAA
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| Protein sequence | MQLLSLTLDG FKSFAQKTTI KFEPGMTGIV GPNGSGKSNI IEAIQWVMGE QSAHHLRGDR
MADVIFNGSS DRKPLNRALV SITLDNSDHY LASEFTELTI TRKIYRNGDS EYLINDQNVR
LKDITDLFID SGLGRESFSI ISQGRIEEIF NGKPIDRRGI IETVAGVAKY KKNKETAEKR
LTTTMENLNR VNDIISELEK QIEPLEEQSA IAQDYLEQKK QFDVLDRTQT VRHYDEYYGK
LTKLGAKLKQ AEEMVKDYQR QAGHDRQQLD NLKQKRQQLN ATKDRLQAII LNQTEAIAKY
ENQQSVSSVR REQRENEQRR LTAQQAELNA RLKEVKASQR ANDEQLAEQK ALINSQQAEF
EAARKMSSSE RIATLKQQVE DLRNQQVSLM QERTTIHNQQ SFLSRNHEQA MSLQRQNVEE
LDATKNQLAE INQEFDRYQQ AVAITKESLQ NVSEKLKAAQ DHREKLNYGY QTKQRDWYAA
LGDVRSLKSR INAYQSMADE YSGYYRGVQE VLRQRQQFPG LAGAVSELFD VPAKYTQAIE
TVLGSQLQQL VVDRQATAKA IINFLIKTRA GRVTILPLDT LSHRRPLSIW PQLTGLPGFL
GRATELIKFD QKFQLIADHL LGTTVIADNL DHATEIARAG RHMVRVVTLD GQLINASGAM
TGGATRSQRT GLLSQKQMAK QLEEELKKQE QLAANLEQEV AKLQQAQKAN EQVVADYQQQ
VQTLQDKFHE QESSCQLISS KYETLTNRVQ ILETQNKQQD TQHQDYESQV QQNNEQADKV
NQELTQVVAK IKQILTQIDE LQNDESTQAR QLAQMQQKIA VAEERLQQYQ RQSQEYNRQR
REVEESLEKV TIAIAELTTQ SASQSTSEQS TQTALKDAKE EQAKAKVQLE DNSVALEELE
QKLSQAEAHY NRLQELQRAA LDDRNNLNEE RVKYESMVDQ ALNRLSEQYS MTIDEARQQM
SKLDEETLAT RLKLLKRGLD DLGQVNVGAI EEYERVRERY DFLKGQQDDL LASRAQLNQT
MGEIDAQVKK RFITTFNQVS QKFDETFQQI FSGGHAKLVL TDPHDLLTTG VDIMAQPPGK
KNQHLSLLSG GERALTAITL LFAILKVRPV PFAILDEPEA ALDEVNVQRF AHYLSKFGTE
GPQFIVITHR KGTMMDADVL YGVTMQESGV SKMVSVDVVD TLQESDN
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