| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1151 |
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| Symbol | trmD |
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| ID | 5189097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1203505 |
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| End bp | 1204263 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590990 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001271745 |
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| Protein GI | 148544375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000840212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGATTG ATATTTTAAG CTTGTTCCCC AATATGTTTC AAGCAACAAT GGGGGAATCC
ATTATCGGTA AGGCACAAGA TAATGGATTT ATCGACATTA ATGTGACCGA TTTTCGTCAA
TATACTACCG ATAAGCATAA TCATGTTGAC GATGCGCCAT TTGGTGGGGG AGCGGGGATG
CTTCTTCAAG CGCAACCGAT TTTTGACGCA ATGGATGCAA TTCATGAACA AACGAAAGAT
CAGTATTCAA AGGGACGGGT TATTTTAATG GATCCCGCTG GTCGAAAGTT TGATCAAGCT
TACGCCAAAG AATTAGCCCA AGAAGACCAC TTAACATTTA TCTGCGGTCA TTATGAGGGA
TATGATGAAC GAATCCGTAA TTTAGTCACC GATGAAGCCT CTCTTGGTGA TTATGTACTA
ACAGGTGGGG AATTAGCAGC GATGGTGATG ATTGATGCAA CCGTTCGTTT TGTTCCTGGT
GTCCTCGGTA ATATGTCTTC ACCAATGGGA GATTCATTTA GTAACGGTTT GTTAGAATAT
CCTCAATATA CACGTCCAGC AGATTTTCGG GGGATGAAAG TACCGGAAGT CCTTACGAGT
GGTAATCATC AGAAAATTAA AGAATGGCGG ATGCGCGAAT CACTACGACG GACTCTTCAC
CGCCGACCAG ATCTTTTAAA AACCGCTAAG CTCAGTCGAG AACAACAATT AATGTTAGAA
GATATTAAGC TGGATGAAGA TCCAACTGTT CCAGACTAA
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| Protein sequence | MRIDILSLFP NMFQATMGES IIGKAQDNGF IDINVTDFRQ YTTDKHNHVD DAPFGGGAGM
LLQAQPIFDA MDAIHEQTKD QYSKGRVILM DPAGRKFDQA YAKELAQEDH LTFICGHYEG
YDERIRNLVT DEASLGDYVL TGGELAAMVM IDATVRFVPG VLGNMSSPMG DSFSNGLLEY
PQYTRPADFR GMKVPEVLTS GNHQKIKEWR MRESLRRTLH RRPDLLKTAK LSREQQLMLE
DIKLDEDPTV PD
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