| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1150 |
|---|
| Symbol | |
|---|
| ID | 5189201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1202064 |
|---|
| End bp | 1203494 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640590989 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001271744 |
|---|
| Protein GI | 148544374 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000287534 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAATTAAACG ATTATTTCTT AAGCAGAACC CCCGCGTTTA TGAAGAAAAG
GATGCGCAAC TAACCCCTAG CTTGCGAACA AGAGACTTAA TTGGATTAGG AACGGGGATG
GTCGTGGGAA CGGCTATCTT TACTTTACCA GGGATTGTGG CAGCTGAGCA TACTGGTCCC
GCGGTTCCAT TGGCCTTCAT TGTAGCCGCA ATTGGTGCAG GATTATCGGC ATTAGCTTAT
GCGGAAACGT CCTCGGTACT ACCTTTTGCT GGTTCCGCCT TTTCCTGGAT CAATGTTTTG
TTTGGTGAAT TCTTTGGCTG GATTGCTGGT TGGGCGCTTT TAGCAGAGTA TTTTATTTCA
GTCGCCTTTG TTGCGTCTGG ATGGTCAGCT TATATGCAAG GCTTTTTAGG CAGCTTTGGG
ATTAAATTAC CGCATGCCTT AACTGGTGGG TTTGATCCAC ATACAGGGTC TTATATTGAT
ATTCTGGCCG CCTTTGCAAT TCTAATTGTT GGAATCTTAA TTTCCCGTGG CGTTCATCAG
GTTAGCCGGA TTGAAAATAT TATTGTTAGT GTAAAACTAC TAGTAATTTT AATGTTTATC
GTTGTGGGGG CAACTGCAAT CCATCCGCAA AACTATGTCC CATTTCTCCC TGCTCATCAA
CCAGGCACCA CTTTTGGAGG CTGGCAGGGG ATATTAGCTG GGACTGCGCA AATCTTTATT
GCCTATGTCG GCTTTGATGC GATTGCGGCT AATACCGCTG AAACGATTAA TCCGCAAAAG
ACAATGCCAC GAGGATTGAT CGGGACGCTA TTACTAGGAA CAGGCTTCTT TATTGCAGTT
TCGCTCGTAT TAGTGGGGAT GTTTAAATAT AGCCGTTATG CAAATAATGC AGAACCAGCA
GCCTGGGCTT TAAGACAGTC GGGACACTAT ATTACGGCGA ACTTGCTTTC CGTTGTAGCG
ATTGTTGGTA TTTTCTCGGC ATTAATCGCA ATTCTTTTAG CTTCCTCTCG ACTAATTTAT
GCCTTTGGAC GGGACGGGTT ACTACCAAAA TCACTTGGAC AAATCGATGA TAAGCACGTC
CCTAATCATG CATTATGGAT GATTACTTTC TTGGCCATGA TCTTGGGTTC TGTTTTTCCG
TTTACGTTCT TAGCAACCCT TGTTTCTGCG GGAACTCTGG TCGCATTTAT CTTTGTTTCT
CTGGGAATCT ATGCCTTGCG TCCGCGGGAA GGGGTAGATT TGCCCGAAGC TCAGTTTAAG
ATGCCATTAT ATCCAGTGCT TCCAGCAATT TCAGCGATCT TTTCGGCAGT GATCTTCTGG
GGCCTAAATA CTGATGCAAA AATTTTAATG GTTGGTTGGT TTGTGATCGG TTTGTTAATT
TACTTTATCT ATGGAATTCG TCATTCAATC ATTAATAAAG AAACCCATTA A
|
|---|
| Protein sequence | MKKLIKRLFL KQNPRVYEEK DAQLTPSLRT RDLIGLGTGM VVGTAIFTLP GIVAAEHTGP
AVPLAFIVAA IGAGLSALAY AETSSVLPFA GSAFSWINVL FGEFFGWIAG WALLAEYFIS
VAFVASGWSA YMQGFLGSFG IKLPHALTGG FDPHTGSYID ILAAFAILIV GILISRGVHQ
VSRIENIIVS VKLLVILMFI VVGATAIHPQ NYVPFLPAHQ PGTTFGGWQG ILAGTAQIFI
AYVGFDAIAA NTAETINPQK TMPRGLIGTL LLGTGFFIAV SLVLVGMFKY SRYANNAEPA
AWALRQSGHY ITANLLSVVA IVGIFSALIA ILLASSRLIY AFGRDGLLPK SLGQIDDKHV
PNHALWMITF LAMILGSVFP FTFLATLVSA GTLVAFIFVS LGIYALRPRE GVDLPEAQFK
MPLYPVLPAI SAIFSAVIFW GLNTDAKILM VGWFVIGLLI YFIYGIRHSI INKETH
|
|---|
| |