| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1116 |
|---|
| Symbol | |
|---|
| ID | 5189275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1180692 |
|---|
| End bp | 1181882 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590955 |
|---|
| Product | HK97 family phage portal protein |
|---|
| Protein accession | YP_001271710 |
|---|
| Protein GI | 148544340 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4695] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCTAT TTAATCAAAA GGTTAGTCCG GGATTATCGG TTACAGATGA TACTGATATT
TTGCACTTCT TAAATCCTGA TAATTCAGAT AAGTATGTAG ACGCTCGGAC TGCTTTGAAG
AACTCTGACA TTTATTCAAT TGTTTTTCAG TTAAGCGCTG ATTTAGCAAA TGGAAAACTT
AAAGCAGACG CGCCTCGGGC ACAAGGAATT CTTAACACCC CAACACAAAC GAGTAACGCA
CATTCGTTTT GGCAATCGAT GTTTGCTCAA TTGCTGTTAG GTGGGGAATG CTTCGCTTAT
CGTTGGCGCA ATCAAAACGG AACCGATATG ACATGGGAGT ATTTGAGACC GTCTCAAGTT
ACTCCTTTTT TATTAGAAGA TGGTTCTGGA TTAATCTACA ACATTAATTT TGATGAACCA
GAAATAGGAG TTATGGAAGC AGTTCCGCAG TCCGATTTAA TCCACGTTCG TTTGCTATCG
CAGAATGGCG GTAAGACTGG GATTAGTCCT TTATCTGCAT TAGCAAATGA ACTTCAAATT
AAAGATCAGT CTAACAAGCT CACATTAAGC GCTCTGGGAC GTTCTATTCT TGCTCCGGGT
ATTTTATCGA TTAAACACGG AGGATTGCTC AGTGATAAGG ACAAGGCTTC TCGTTCAAGG
AAATTTATGA AGCAAACGTC TGACTCCAAG AATGGGCCGA TCGTTCTCGA TGACTTGGAA
GAATATACGC CGCTAGAAGT TAAAAGCAAT GTTGCCCAGT TACTTAATCA AGTTAATTGG
ACTGGCGCTC AAATCGCTAA AGTTTATGGT GTCTCTGACA GTATTATTAA TGGTCAAGGT
GATCAGCAAT CATCAATTCA AATGATGGGT AATGCCTATG TTAAGTCACT TTCTCGATAT
GCTAAAGCAA TTACGGGAGA ACTTAATAAT AAGCTTAATG CTAATATCAC TTTGGATTTG
CGGTCTGCAA TTGACCCATT AGGCGATGAG TACGCTTCTA CAATTGCTAA CTTACAGAAG
AACGGGACAC TTGGTGCTAA TCAAGCAGCT TGGTTATTGC AACAAGTCGG ATACCTACCA
GATGATATGC CTGAAAAAGA ACAACCAAAG GTACAAGTTC AGCCCGTTCA AATGGTTTCT
TCTGATGATA AGCAATCAAC GGAAGGAGGT GATAATGATG ACCAAGATTA A
|
|---|
| Protein sequence | MPLFNQKVSP GLSVTDDTDI LHFLNPDNSD KYVDARTALK NSDIYSIVFQ LSADLANGKL
KADAPRAQGI LNTPTQTSNA HSFWQSMFAQ LLLGGECFAY RWRNQNGTDM TWEYLRPSQV
TPFLLEDGSG LIYNINFDEP EIGVMEAVPQ SDLIHVRLLS QNGGKTGISP LSALANELQI
KDQSNKLTLS ALGRSILAPG ILSIKHGGLL SDKDKASRSR KFMKQTSDSK NGPIVLDDLE
EYTPLEVKSN VAQLLNQVNW TGAQIAKVYG VSDSIINGQG DQQSSIQMMG NAYVKSLSRY
AKAITGELNN KLNANITLDL RSAIDPLGDE YASTIANLQK NGTLGANQAA WLLQQVGYLP
DDMPEKEQPK VQVQPVQMVS SDDKQSTEGG DNDDQD
|
|---|
| |