Gene Lreu_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1115 
Symbol 
ID5189314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1179974 
End bp1180705 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content39% 
IMG OID640590954 
Productpeptidase S14, ClpP 
Protein accessionYP_001271709 
Protein GI148544339 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGA TTAACGTTAA GGGCGTTATT GTCAGCAATG ATGATGCCGA TATCTATGAT 
TGGCTTGGAT ATGATTGTGT TAGCCCTAAT CAAGTAGAAG ATGTACTTAA TAATAGCGAT
GAGGATATTG AAGTTGATAT TGCTAGCGGT GGGGGTAGCG TCTTTGCTGC TTCCGAAATC
TATACCATGC TTAAAGCTTA TTCAGGTAAG GTAGTAGTTA ATATTCAAGG ATTAGCTGCT
TCTGCTGCTT CTGTTATTGC GATGGCAGGG GATGAAATCA ACATGAGTCC TACCAGTCAA
ATGATGATTC ATAAAGCCTC TACTATTTCT ATGGGGAATG CGGATGACTT TGCGCATGAT
TCTAAGATGT TAGATGTTAT GGACCAGTCT ATTGTTAACG CTTATGAAGC TAAGACGGGA
ATGGATCGTG ACGATATCTT ACAGTTAATG GCTAATGAAA CTTGGATGAC TGCTCAAGAT
GCAGTTGACA AGGGCTTTGC TGATAATATT TCGGCTGGTT CTAAAACTCC CCAAGTGGTT
AATGCTGTTA GCAACCAACC CATTCTTAAT TCTACTGCTA TCGCAAAAAT CAAAACTGTT
CTGGCTAAAG CACGAGATGC CAAGTCTAAA AACGAAGTGG AAACACCGAT AAATAACAAA
GAAAAGCCAA CTCCTAGTCT TAAAGATCAG AAGTTGGCAA TTTTACTAGG AGATGAAATT
AATGGGAATT AA
 
Protein sequence
MTKINVKGVI VSNDDADIYD WLGYDCVSPN QVEDVLNNSD EDIEVDIASG GGSVFAASEI 
YTMLKAYSGK VVVNIQGLAA SAASVIAMAG DEINMSPTSQ MMIHKASTIS MGNADDFAHD
SKMLDVMDQS IVNAYEAKTG MDRDDILQLM ANETWMTAQD AVDKGFADNI SAGSKTPQVV
NAVSNQPILN STAIAKIKTV LAKARDAKSK NEVETPINNK EKPTPSLKDQ KLAILLGDEI
NGN