Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1094 |
Symbol | |
ID | 5189029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1158479 |
End bp | 1159678 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590933 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001271688 |
Protein GI | 148544318 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000219862 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AATCATTCAA GAAAGTTAAG AACTTGGCAC TAGCAACAAT GGCTAGTGCT TTTTTATTAG GTTCAGCAAG TGTTGCTTCT GCTAATACCG GTTGGCAAAA GCAGAATGGC ACCTATACTT ATTACGAGAG CAACGGGAAA GTGCAAAAGG GTCGTTCCTA TCGGCAACTT CCTAAGGCTA ATCCTGGAAC AAGCTGGTAT TTAACCCAAG ATGGTAAGAT GCTAACTGGA GTTCAACAAT GGCAAGGTTC TTATTGGTTC TTTAATCAAG ATGGAACCCT CCATACTAAG CGTGACTATG TGCAATCCCA GTGGGGTGAT TGGTACATGA TTGGTGATAA TGGTCAGGTT CTTTCTGGAG TTCAACAATG GATGGGAAAC TATTATTACT TTGAACCCGG CACTTATCTA AAAGCCAATA AGCAGGAGTA CGTAAAGTCA CAATGGGGTG ACTGGTACAT GGTTGGCAAA GATGGCCGTC TAATGAGCGG ACTTGTTAAC TGGCAAGAGA ACAAGTATTA CTTTGACCCA TCAACCTATC TCAAAGTAAC GAATACTAAT GTAACGGTTA ATGGCGTTAC CTACCATGCG GACCAGAATG GGATTCTTTC AGAAGTACAG AATACTGGTT TCACTCCATC ACAAATCAAC CACACCTATG ACCTAGCTGA TTGGCAAGGT AGTAGCCAAA CTGCAATCAA CGATTACATC ATCATGCACG ATGTAGGTGC TGAGTCTGGT GCGGCTGCTA ACGCTAACTA CCTTCACAAT AATTGGGAAT CAGCTTATAC CCAATTTGTT GTCGGCGACG GTGGTCAAGT CTTTGAGGTT GGTGAACCGG GTTATGTTTC TTGGGGTGCT TTGAACGCTA ACCCTTATAG TCCAGTACAA ATTGAGCTTG GTCGGACTTA TAATCGTGAT CAATTCATTA AGGACTACAC TGCTTACATC AATGTTGCTC GGTACTATGC TAAGCAATAT GGCATTCCGC TAACTCTTGA TGCTGGTGGT GCAGGAACTC CTGGTGTTAA GACCCACAAC TGGGTAACTG AAAATATTGG TGGATCACAT GTTGATCCAT ATGGTTACCT TGCAAGTTGG GGTATTGGTT ATAATCAATT TGCTTCTGAT ATTGCCAACG GGGTAAATGC TTCTCAACTT AATTCAGTTG TTTACTCGCA ACGACAATAA
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Protein sequence | MKNKSFKKVK NLALATMASA FLLGSASVAS ANTGWQKQNG TYTYYESNGK VQKGRSYRQL PKANPGTSWY LTQDGKMLTG VQQWQGSYWF FNQDGTLHTK RDYVQSQWGD WYMIGDNGQV LSGVQQWMGN YYYFEPGTYL KANKQEYVKS QWGDWYMVGK DGRLMSGLVN WQENKYYFDP STYLKVTNTN VTVNGVTYHA DQNGILSEVQ NTGFTPSQIN HTYDLADWQG SSQTAINDYI IMHDVGAESG AAANANYLHN NWESAYTQFV VGDGGQVFEV GEPGYVSWGA LNANPYSPVQ IELGRTYNRD QFIKDYTAYI NVARYYAKQY GIPLTLDAGG AGTPGVKTHN WVTENIGGSH VDPYGYLASW GIGYNQFASD IANGVNASQL NSVVYSQRQ
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