Gene Lreu_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1074 
Symbol 
ID5188170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1137488 
End bp1138150 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID640590913 
ProductL-serine ammonia-lyase 
Protein accessionYP_001271668 
Protein GI148544298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000107918 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ACTATAAAAG TGTTTTTGAC ATTATTGGAC CAGTAATGAT TGGTCCTTCT 
AGTTCGCATA CTGCAGGGGC GGTCAAGATT GGTCGAGTCG CAAATAAGCT TTTTGGCATG
GTTCCACCTA AAGTAACCGT TCACTATTAT GGATCTTTTG CCCAGACGCA TCGTGGCCAT
GGCACAGACT ATGCAATTGC GGCGGGATTG CTAGGATTTT CGCCAGATGA TTCGCGAGTT
CCATCGGCGC CAATGATTGC TCGCCAAAGA GGAATAGATC TTCGCTTTGT TGAAGAAGAG
GGTGAAAGCC CGATTCACCA TCCTAACACA GCCATTCTTC AAATGACTGG TGACAAGACG
AGGGTAACGG TTGCCGGTTG TTCGATTGGT GGCGGGATAA TTGAAATTAG GGCTATTAGC
CTTGATGGTG TTGATATTTT ACCAGCGGGT CCCTTACCAA TTGTTATCTT TCGCGATTAT
AGTAAACAGA TGGCCAATGC ACTGGCGGTC AATACTGATT TGGAAGAAAA AGCACCATTT
ACCCGGCGGC AAGTATTACG GGCAGATGAT TGTGATATTT ATGTTTACGA TATTAAGAAA
CCGATGCAGC CAGCGACGAT TGCTTATTTT GAAAAGAAGT ACCCGGCTGC AATTTGTCTT
TAG
 
Protein sequence
MKNNYKSVFD IIGPVMIGPS SSHTAGAVKI GRVANKLFGM VPPKVTVHYY GSFAQTHRGH 
GTDYAIAAGL LGFSPDDSRV PSAPMIARQR GIDLRFVEEE GESPIHHPNT AILQMTGDKT
RVTVAGCSIG GGIIEIRAIS LDGVDILPAG PLPIVIFRDY SKQMANALAV NTDLEEKAPF
TRRQVLRADD CDIYVYDIKK PMQPATIAYF EKKYPAAICL