Gene Lreu_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1071 
Symbol 
ID5188197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1134250 
End bp1135917 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content43% 
IMG OID640590910 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001271665 
Protein GI148544295 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase
[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase
[TIGR03143] putative alkyl hydroperoxide reductase F subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000005332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC AACATTTATA TGATTTAATC ATCGTTGGTG CTGGACCAGC GGGATTATCT 
GCTGGTTTAT ATGCTGGACG TGCAACCCTG GATACATTGA TTTTAGAAGG AGATACTGTC
GGCGGTCAGG TAACAACGAC CTCGGTGGTT TATAATTATC CAGCTGTCGA AAAAGTCGAC
GGTACCCAAT TGATGAACCA GATGCAAAGC CAGGTCGCTA GCTTTGGGGT TGAAATTCAA
CATGATGCGG TTGAAAAGTT TGATCTTACT GGTGAAGTTA AGACATTGAT TGGCAAGAGT
GGTCAAAAAT ATACTGCCCG AAGCGTAATT ATTGCGACTG GTGCTAACCC TAAAAAAGTT
GGTTTTCCCG GTGAAAATGA ATTCCGTGGA CGGGGAATTG CTTATTGCTC AACTTGTGAT
GGCGAACTTT TTACCGGTCT TCAAGTCTTT GTCGTTGGTG GCGGATATGC GGCCGCTGAA
GAAGCTGACT ATTTGAGCCG CTTTGCCAAG CACGTTACTG TTTTAGTTCG TGGCGATCAT
TTTGCATGTC CTGTATTGAC GGCTAAGCGT GCCTTGGATA ATCCTAAAGT TAGTGTGGAA
TACAATACTG AGGTAAAGGA AGTTAGTGGG GATGATTACC TTACTACTGC TACCTTGGTT
AATAATAAGA CTGGCGAAGA GACGGTTTAC CATGTCGATG ATGGTGACCA GACATTTGGG
ATGTTCATTT ATATTGGTAC GCAACCAGCA ACGAAAGCAT TAGCTAATAT CCTTGATTTG
GATGATCGGG GCTATATCAT GACGGATGAA AATGGTAAGA CAAACATCGA TGGCGTTTAC
GCTGCTGGGG ATGTTATCCA TAAAAATCTT CGTCAGATCG TGACAGCTGC ATCCGATGGG
GCGGTTGCTT CTACTGCTGC AGAACGATAC ATTATTTTGC AAAAGGAAAA GCAAGGTATC
CCAATTCATG CAGAAACTAA TAAAAAGCCT GCTAAGACTG TGGGGCAGAC GAGCGAACTT
AGTCAACAAG AAAACACTAC GTCGCATGAA GGAAACTGGT TGCCAGCTGA GATTGACCAA
CAATTGCAGC CAATCTTTGC CCGTTTGACT AAGGATATTA AACTCCAAGT GTTAACCAAT
GGGACAGAGC TTAGCAATCA GTTAGTTAGC TTTGTTGAAG AATTTGCTTC ACTTGATAAG
CACCTGCAGA TGGAGACTAA ACCGGCGCCA GCGGACGTAA AGTACTTACC ACAATTGCGC
TTGCTTGATG CGGATGGTAA TGATACTGGC TTACATTATG CGGGGATTCC AACTGGTCAC
GAATTAAACT CCTTAGTTCT AGGTGTCTAC AACGTTGCCG GTCCTGGACA AACAATTGCA
CCAGAAATGG TAGAACGAAT TAAGAAACTT GCGCCGACTA AGATTCGGAT TGGCGTTTCC
TTAACTTGTC ATTTCTGTCC TGATGTTGTT GCGGCTTGTC AACGGATGGC TTCTCTCAAC
ACGGGAATTA CTGCTACAAT GATTGATCTG CAACACTTCC CAGAATTACG GAAAGAAAAG
AAGATCATGA GTGTTCCAGC GACGATGATT GATGATGACC CAGTTATTTT TGGAAGTCAA
TCATTGGAAG AACTAGTTAC GGCAGTTGAA AAACATCATC AAAATTAA
 
Protein sequence
MAEQHLYDLI IVGAGPAGLS AGLYAGRATL DTLILEGDTV GGQVTTTSVV YNYPAVEKVD 
GTQLMNQMQS QVASFGVEIQ HDAVEKFDLT GEVKTLIGKS GQKYTARSVI IATGANPKKV
GFPGENEFRG RGIAYCSTCD GELFTGLQVF VVGGGYAAAE EADYLSRFAK HVTVLVRGDH
FACPVLTAKR ALDNPKVSVE YNTEVKEVSG DDYLTTATLV NNKTGEETVY HVDDGDQTFG
MFIYIGTQPA TKALANILDL DDRGYIMTDE NGKTNIDGVY AAGDVIHKNL RQIVTAASDG
AVASTAAERY IILQKEKQGI PIHAETNKKP AKTVGQTSEL SQQENTTSHE GNWLPAEIDQ
QLQPIFARLT KDIKLQVLTN GTELSNQLVS FVEEFASLDK HLQMETKPAP ADVKYLPQLR
LLDADGNDTG LHYAGIPTGH ELNSLVLGVY NVAGPGQTIA PEMVERIKKL APTKIRIGVS
LTCHFCPDVV AACQRMASLN TGITATMIDL QHFPELRKEK KIMSVPATMI DDDPVIFGSQ
SLEELVTAVE KHHQN