| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1061 |
|---|
| Symbol | |
|---|
| ID | 5188629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1124352 |
|---|
| End bp | 1124696 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640590900 |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_001271655 |
|---|
| Protein GI | 148544285 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000187009 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTTA AGTATCGTCG AAAAGTAATT AACGATGAAA TATCTGAATA TCTTAAACAT
CGTTTTGTAG TTGTGGGACA AGCATACGGT ATTAATTTGC AAGAATGGAA TCATGATCAG
GACCACGTAC ATGTTTTGTT TAGAGCAACA CCTCATAAGG AAATGGCTAA ATTTTTAAAT
GCTTACAAAT CGTCTAGCTC CAGAATGGTC AAAAAACAAT TTCCAGAAAT CAAGCAGTAT
CTTTGGAAAT CAGCCTTTTG GACACAAAGC TATTGCTTAA TTAGCACTGG TGGAGCGCCT
TTAGAAGTTT TAAAACGATA TATTGAAAGT CAAGGGAGAA AATAA
|
|---|
| Protein sequence | MVVKYRRKVI NDEISEYLKH RFVVVGQAYG INLQEWNHDQ DHVHVLFRAT PHKEMAKFLN
AYKSSSSRMV KKQFPEIKQY LWKSAFWTQS YCLISTGGAP LEVLKRYIES QGRK
|
|---|
| |