| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1021 |
|---|
| Symbol | |
|---|
| ID | 5189278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1072546 |
|---|
| End bp | 1074075 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590860 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_001271618 |
|---|
| Protein GI | 148544248 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000296334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT CATTAAAGAA ACAAAACGAA GCACTACGTG CGCAGTTGAA GAAAGCGCAA
GAACAACTTG AACGACAAGC AGCTACGATT AAGCAACTGC AGGAAATAAT TTTTGGAAAA
AAAACTGAAG TTTTAGAGCA GGTAGCTGAT GGACAACTAT CACTATTTGA TCCAGTTGAT
GATCTGAACT TGGATCAAGA GATTACTGAA GTAGTTAAAA CAACTACGAC TAAGGTCGTA
CGTCATCGAC CAGCAAAGAA GCAACTAACT CGTCAAGAGT TTTTAGACCA ACTTCCTCAA
GTCGAGGAAG TTGTTTCTTT AAAAACGACT GCCTGTCCAG ATTGTCAGCA CAAAATGGCT
CATATTGGAA AACGATTGGC ACGACGGGAA GCTAGACTAA AAGAGCCCGA ATTGTATTGT
GCCAACTTAT ATGAGGAAAG CTATAAGTGT AAACACTGTA GTCAAGATGA AAATGATAAA
TTGGTAACTA GTAAGGCGCC CATGGCTTTA TTACCACATA GTTACTTTTC AAGCAGTACT
ATGGCATTCA TCGCCTATTT AAAATTTAAT CTGGCGTTGC CTTTCCATCG GCAAGAAGGT
TTTGTACAAG GGCTGGGATT ACCTGTTAGT GCCAAGCAAA TGGCCTCGAA TATTATTAAA
GTTAGTCAAA CGTACTTAGA GCCGTTGTAT CAGTATTTAA GCAATATAAT TAGACAAGAA
CCAGTCATTC ATATGGATGA AACACCTTTT AAAGTCGTTG ATAGTCCTAA ATCCCAAGAC
TATTTCTGGG TAACGCGGAC AACGAAAGAG TTTGCCCAAC ATCCGGTTGT AGTCTTTCAT
CATGCCAATA CGCGTTCTGG TAGAATCATT GGACAAATAG TCGGTAATAA TTATCCGGGT
ATTATCATGT GCGATGGGTA TAAAGGGTAT AGTAATCAAC TCTATCCGCA AGCAAAATTT
GGTTCGTGCT TAGTGCATAT TCGGCGAGAG TTTGTCAAAC TGGTTAAGGC ACTTCCCAAA
ACAATGAAGG CGTCCAAAGC GCAACAAGCA ATAACTCTTC TTAGTCAGGT TTTCCATTCG
GAAAACCAGT TGAGTTATCA AACGGCTAAT GAGAAGTTAG TGCAACGGCA AATCCATGTC
AAACCGCTAA TGGATAAATT TTACAATTAC ATTAGCCAGA TTAGCCAGCC GATTGGACAG
TTGCGTAAGG CAATTCAGAA CGCCATCCAG TTAAAATCAC GAGTGTATCG TGTATTTGAA
AATGGACAAT TACCGTTAAG CAACAATTCA GTTGAGCAAA GTATTCGGCC ATCAACACTA
ATTCGAAAGA ATTGTCTATT CGCAAAAACC GAAGAAGGTG CCAAGGCGAA CGCCGTCTAC
TATAGCTTAG TAGAAACAGC TAAACTAAAC CAGCTTAACG TCCAGCGGTA CTTAAAATAC
TTGTTTGATC ACCTACCAGA GAGCAATTGT CAAGATCTGG CAGCTTTTTT GCCGTGGTCA
AAAAGCGTAC AAGAAGAATG TCACGAATAG
|
|---|
| Protein sequence | MTESLKKQNE ALRAQLKKAQ EQLERQAATI KQLQEIIFGK KTEVLEQVAD GQLSLFDPVD
DLNLDQEITE VVKTTTTKVV RHRPAKKQLT RQEFLDQLPQ VEEVVSLKTT ACPDCQHKMA
HIGKRLARRE ARLKEPELYC ANLYEESYKC KHCSQDENDK LVTSKAPMAL LPHSYFSSST
MAFIAYLKFN LALPFHRQEG FVQGLGLPVS AKQMASNIIK VSQTYLEPLY QYLSNIIRQE
PVIHMDETPF KVVDSPKSQD YFWVTRTTKE FAQHPVVVFH HANTRSGRII GQIVGNNYPG
IIMCDGYKGY SNQLYPQAKF GSCLVHIRRE FVKLVKALPK TMKASKAQQA ITLLSQVFHS
ENQLSYQTAN EKLVQRQIHV KPLMDKFYNY ISQISQPIGQ LRKAIQNAIQ LKSRVYRVFE
NGQLPLSNNS VEQSIRPSTL IRKNCLFAKT EEGAKANAVY YSLVETAKLN QLNVQRYLKY
LFDHLPESNC QDLAAFLPWS KSVQEECHE
|
|---|
| |