Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0978 |
Symbol | |
ID | 5188706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1033558 |
End bp | 1034496 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590809 |
Product | alpha/beta hydrolase domain-containing protein |
Protein accession | YP_001271576 |
Protein GI | 148544206 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.689687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATTTATG TTTTAAAAGA TTTATGTAAT ACTATTGCTG AAGTCTATGG CAAAAGTATT TTAAAAGGAG TTTTTATCAT GAAACATACG CTTAAAGTTG ATCAAGTACG TGACGGTTTA TGGCTAGATT CAGATATTAC GTATACGCAA GTTCCTGGAT GGCTTGGTAA TACAACGCGA GATTTGAAGC TTTCAGTCAT TCGACATTTT CAAACTAATG ATGATACACG TTATCCAGTA ATTTTTTGGT TTGCTGGTGG CGGCTGGATG GATACTGACC ACAATGTTCA TCTGCCGAAT TTGGTTGATT TTGCTCGGCA TGGTTACATT GTTGTCGGCG TCGAATATCG TGATAGCAAC AAAGTTCAGT TTCCTGGGCA ATTAGAAGAT GCTAAGGCTG CTATTCGTTA TATGAGAGCT AATGCCAAGC GCTTCCAAGC TGATCCTAAT CGGTTTATTG TGATGGGAGA ATCGGCCGGT GGACATATGG CAAGTATGCT AGGTGTTACT AACGGCCTTA ACCAATTTGA CAAAGGTGCT AATTTAGATT ACTCCAGTGA TGTTCAAGTA GCAGTTCCTT TTTATGGTGT GGTTGATCCC TTAACCGCTA AAACAGGAAG TGCATCAAAC GATTTTGATT TTGTTTACCG TAACTTGCTT GGTGCTGAGC CTGAAAACGC TCCTGAGCTT GATTCTGCCG CAAATCCCCT CACCTATGTA AATTCTAATT CTACGCCCTT TCTTATCTTT CATGGGACAG AAGATGTCGT TGTTCCAATT AAAGATAGTG AAAAGCTTTA TGATGCATTA GTTGAAAACA ACGTTCCTGC TGAATTATAC GAAATCGAAG GCGCAAGTCA CATGGATGTG AAATTCCTTC AACCACAGGT ATTTAAGATT GTGATGGACT TTTTAGATAA GTATTTAACT CGGTCATAG
|
Protein sequence | MIYVLKDLCN TIAEVYGKSI LKGVFIMKHT LKVDQVRDGL WLDSDITYTQ VPGWLGNTTR DLKLSVIRHF QTNDDTRYPV IFWFAGGGWM DTDHNVHLPN LVDFARHGYI VVGVEYRDSN KVQFPGQLED AKAAIRYMRA NAKRFQADPN RFIVMGESAG GHMASMLGVT NGLNQFDKGA NLDYSSDVQV AVPFYGVVDP LTAKTGSASN DFDFVYRNLL GAEPENAPEL DSAANPLTYV NSNSTPFLIF HGTEDVVVPI KDSEKLYDAL VENNVPAELY EIEGASHMDV KFLQPQVFKI VMDFLDKYLT RS
|
| |