Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0963 |
Symbol | |
ID | 5188538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1024123 |
End bp | 1025505 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640590794 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001271562 |
Protein GI | 148544192 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.120749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGACAAT CGCAGAAAAC AGAACAACAA GCTGACCGCT TGTCGAGGAT AGGTTTGGAA AACCGAAAGT ACACAAGGGC GCGTAGTACC GATTATGGTG AAGGTAAAGG TATGAGTGTC ACTATCCAAG ACTTAGTCTT GGACCGCAAT AACCTTAATC AGGCTTATTT GCGAGTTAAG AGAAATAAAG GGGCAGCAGG CATTGACGAT ATGACAGTCA ATGACCTTCT GCCATATCTC AGAGAAAATA AGACGGAATT GATCGCTAGT TTGCGTGAGG GCAAGTATAA ACCAGCACCA GTCAAACGGG TAGAAATTCC GAAGCCTAAT GGTGGAGTAA GAAAACTCGG AATACCAACA GTGGTGGACC GAATGGTTCA ACAAGCTGTG GCCCAAATTC TTACACCTAT CTTTGAGCGT GTTTTCTCTG ATAATAGTTT TGGCTTCCGC CCTCACCGTG GGGCTCACGA CGCTATTGCA AAAGTAGTAG ATCTTTATAA TCAAGGTTAT CGAAGAGTTG TCGACTTAGA CCTAAAAGCC TATTTTGATA ATGTTAATCA TGACTTGATG ATTAAGTATC TTCAACAATA TATTGATGAC CCATGGACAC TAAGGCTCAT TCGTAAGTTT CTAACTAGCG GAGTCTTAGA CCATGGGCTT TTCGCTAAGA GTGAAAAAGG AACCCCACAA GGAGGGCCAT TGTCACCAAT ACTGGCGAAT ATCTATCTAA ATGAGTTGGA TAAAGAGTTG ACTAGACGTG GTCACCACTT TGTGCGCTAT GCGGATGATT GTAACATTTA TGTTAAAAGT CAACGAGCCG GAGAACGAGT AATGCGAAGC ATTACCCAGT TTCTTGAAAA GCGATTGAAA GTTAAAGTGA ACCCAGATAA AACCAAAGTC GGTAGCCCGC TACGGTTAAA GTTTCTTGGC TTTTCGTTGG GTGTAGACCA CAATGGAGCC TACGCCCGTC CAGCAAAACA ATCGCAACAA CGAGTAAAGA AAGCATTGAG GTTATTAACT AAACGTAATC GTGGAATATC TCTGACAAGA ATGTTTGAAG AAATTCAGCG AAAAATGCGT GGATGGCTTC AGTACTACTC AATTGGGAAA CTAACTGACT TTATTCAACG CCTTGACAAG TGGTTGAGGG CCCGAATAAG ACAGTATATC TGGAAGCAAT GGAAGAAGCT TAAAACTAAG GTAACTAACT TACAGAAGCT GGGGCTGTCC CAGCGTGATG CATACGTCTT CGCTAGTACC CGCAAGGGCT ACTGGCGAAC TGCACACAGT AAGACCTTGA GCTATTCTCT AACAAATAGA AAACTGGAAC AACTCGGACT TATGAATATG TCCAAGACGC TCCAGTCAAT TCAAAGTGAT TAA
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Protein sequence | MRQSQKTEQQ ADRLSRIGLE NRKYTRARST DYGEGKGMSV TIQDLVLDRN NLNQAYLRVK RNKGAAGIDD MTVNDLLPYL RENKTELIAS LREGKYKPAP VKRVEIPKPN GGVRKLGIPT VVDRMVQQAV AQILTPIFER VFSDNSFGFR PHRGAHDAIA KVVDLYNQGY RRVVDLDLKA YFDNVNHDLM IKYLQQYIDD PWTLRLIRKF LTSGVLDHGL FAKSEKGTPQ GGPLSPILAN IYLNELDKEL TRRGHHFVRY ADDCNIYVKS QRAGERVMRS ITQFLEKRLK VKVNPDKTKV GSPLRLKFLG FSLGVDHNGA YARPAKQSQQ RVKKALRLLT KRNRGISLTR MFEEIQRKMR GWLQYYSIGK LTDFIQRLDK WLRARIRQYI WKQWKKLKTK VTNLQKLGLS QRDAYVFAST RKGYWRTAHS KTLSYSLTNR KLEQLGLMNM SKTLQSIQSD
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