| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0949 |
|---|
| Symbol | |
|---|
| ID | 5188410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1006153 |
|---|
| End bp | 1007514 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640590780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001271548 |
|---|
| Protein GI | 148544178 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000990304 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGTT TATGGGATTC ATATTGGTTT AAATTAATTA TCATTATTTT AATTCTGCTG
TTAGCTGCTT TATTTACACT GCTGGAGTAT TCAGTTGTTA AAGTGCGGCC TAGTGAGTTA
AAGGAGCTCC GGCAAACGCG AAAAGTCAAA CGCGCGGAAC ACATGGTAGC AAATCTTAAT
GAGTACCTAT CAACAGCTCA AGTCGGGGTT ACGATGACTT CTTTAGTTTT AGGTTGGTTA
GGTGATGAAT TTATCACAGA TCTGTTGCTA AAGATTAATA TCATTCCGCA CGATGTTCTT
CAAGCGATTG CACCAGTTAT CGGTGTTTTA ATTTTTACAT TCTTCCATGC GGTATTTACT
GATTTAGTTC CGAAAAATAT GGCGATTGAT CGACCGGTAC CAATTCTCTT ATCAATTGTT
CACCCGGTAC AATTCTTCCA TACTGTTTTT TATCCCTTCG TTTGGTTATT TGCGGTAGTC
GCTGCGGCAA TTACGAAAAT GTTAGGATAT AATGTTCAGC CAGAAGAAGA CACGTATTCA
CAAAATGAAA TTATGACCTT ATCCCAACAA TCAGAAAAAG CTGGGGAAAT GGATAAGGAA
GACGTTATCT TCATGCAACG AGCTTTTGAA ATGAATGATA AAGTTGCTGA GGATATTATG
ATTGATCGGA CACAATTAGC GGTTATTGAT ATTACGGCTT CAATTGAAGA TGCAGCCAAA
CTTTATTTTG AAAAGAAATT CACGCGTTTC CCAGTTGTTG CTAATAATGA CAAGGACCAC
ATTCTTGGTT ATATTTTTGC ATATGATATT ATGCGGCAAA ACCAAATCAA CCCGCAACAA
TCAGTTCGCA CAATCATGCG CCGAATTCCA ATCGTTTACG AAAATGAACA ACTCACCAAT
GTCCTTGCTG AGATGATGAA AAAACAAGTG CCAATTGTTG TTGTCCAAGA CGAATACGGT
GGTACTTCTG GGATCATTAC TGATAAGGAC ATTTATGAAG AATTATTCGG AACAGTTGGC
GAAGAAATCG ATCATGCTAC CTCTGACATG ATTGAAAAGA AGGATCCTGA TAGCAAGGGT
AATCCTACTT TCGAAGTTTC TGGTAAGATG CCATTAGATG ATTTTGAACG TTACTTTGAT
ACAAACATCG AGCAATTTGA TAACTCTGAA GTAACAACCT TAACTGGATT CTTCCTTGAA
CGGCAGTATG ACTTAAAAGT TGGCCAACCA ATTAGAGTCG ATAATTTCTC ATTTACACCT
CTTGATTTGA AGAATGCCTA TGTTAATAAA TTCAAGGTAG TTTACATTAA GCCTAGAAAG
AAGAAGCCAT CAGCTGATGA GGATCAAAAC AAAGAAAAAT AG
|
|---|
| Protein sequence | MNGLWDSYWF KLIIIILILL LAALFTLLEY SVVKVRPSEL KELRQTRKVK RAEHMVANLN
EYLSTAQVGV TMTSLVLGWL GDEFITDLLL KINIIPHDVL QAIAPVIGVL IFTFFHAVFT
DLVPKNMAID RPVPILLSIV HPVQFFHTVF YPFVWLFAVV AAAITKMLGY NVQPEEDTYS
QNEIMTLSQQ SEKAGEMDKE DVIFMQRAFE MNDKVAEDIM IDRTQLAVID ITASIEDAAK
LYFEKKFTRF PVVANNDKDH ILGYIFAYDI MRQNQINPQQ SVRTIMRRIP IVYENEQLTN
VLAEMMKKQV PIVVVQDEYG GTSGIITDKD IYEELFGTVG EEIDHATSDM IEKKDPDSKG
NPTFEVSGKM PLDDFERYFD TNIEQFDNSE VTTLTGFFLE RQYDLKVGQP IRVDNFSFTP
LDLKNAYVNK FKVVYIKPRK KKPSADEDQN KEK
|
|---|
| |