| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0947 |
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| Symbol | |
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| ID | 5188230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1004122 |
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| End bp | 1005510 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590778 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001271546 |
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| Protein GI | 148544176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000410718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC AACGCATTAG CCATGCATTA GTAATCATGG TATTTGGTAC ATTTTTCGGT
CTTCTCTGTT CAACCTTAAT GAACATTGCC CTCCCAACCT TCATGAATGT CTTTCATATT
AGCGAGGCCC AGGTTCAATG GGTGACAAAC GGTTATATGC TTGTCAACGC CCTAATGATT
CCTGTCAGTT CATTTCTTAT AAAAAGATTC CCCTTCAAAA ATCTCTTTAT TATTTTCTCT
GGAATTTTTC TTTTAGGAAC CATTATCGGA GCGATTGCGT GGAGCTTCAA TCTAGTTGTG
GTTGCGCGGA TGATTCAAGC TCTGGGTGCA GGAATGATGA TGCCGCTAGT AAATGTTTTG
GCAATTCGTT ACGCAAAACC GGGTAAAAAA GGGCAAATTA TGGGCATTAT TGGACTTGCC
TTTAATTGTG CCCCCATCTT AGGTCCTGCC ATTTCTGGTT TTCTATTGCA CTTTTTCTCT
TGGCGATATC TTTTCCTACT AATTATTCCT TTTGCAGTAA TTACATTACT ACTTTCATTC
TTCTTACTTC CTAAAATCCC CCATAATGAA CATCCCCGCT TTAATACATT AGCTCTTATT
TTAATCACAG GCGGATTATG GTCACTATTG ATGGGCTTAT CAAATGTTTC GAACAATCAC
TTACTCTCAT TTAATGTTGC AGGGTATGTC CTTATCGGCT TAGTCTTTCT CTTACTGTTC
TTTCTTAACC AACGTCACAG TAGTCGTCAG TTAATCAACT TTGGGATCTT CTCACACAAA
CAATTTGTCT TTGCCACTAT TATTAATATG CTAATTACAT CAACAATGTA CGGTAATGCA
ATTTTGATTC CCCTGTTAGT ACAGATTGTC TTGGGCAAAA GTACGGTTGT GTCAGCCATT
GCTGTCCTTC CAGGGGCAAT CGTAACGGGC TTACTATCGA CAACGAGTGG CCACTTCTAT
GACATTTATC CAATTAAGAT TCTTGTTGGG ACTGGTCTCA TAATCGATAT CATCGGAACA
ATTGGCCAAG CCGCAATCGG TGCGCGTAGT TCTGTCCTCA TGATTACCCT TTTCCAAACA
ATTCGACAGT TTGGATTAGT GACAATGTTA ATCCCTCTGC AAACACAAGC ACTATCATTG
CTACCTAATG AGATCGTTCC TGATGCAGTT GCTACCTTTA ATACGTTACG ACAAATTGCG
GCTGCCTTTG GAACTGCCCT CATCGTTTCA ATTGTTGGCA TTGTTAATCA CTTAGTTCAC
AACCCGTCCT CACACCTCGG TATTCAAGCC GGCTTCCTTC TATGCTTATG CCTGCTATTA
ACTTCGCTAT ACCTTAGCAC TAAGCTATAC CATAAAATTT CTTCGCAAGC GCAATTAGAA
AATGCATAA
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| Protein sequence | MKNQRISHAL VIMVFGTFFG LLCSTLMNIA LPTFMNVFHI SEAQVQWVTN GYMLVNALMI
PVSSFLIKRF PFKNLFIIFS GIFLLGTIIG AIAWSFNLVV VARMIQALGA GMMMPLVNVL
AIRYAKPGKK GQIMGIIGLA FNCAPILGPA ISGFLLHFFS WRYLFLLIIP FAVITLLLSF
FLLPKIPHNE HPRFNTLALI LITGGLWSLL MGLSNVSNNH LLSFNVAGYV LIGLVFLLLF
FLNQRHSSRQ LINFGIFSHK QFVFATIINM LITSTMYGNA ILIPLLVQIV LGKSTVVSAI
AVLPGAIVTG LLSTTSGHFY DIYPIKILVG TGLIIDIIGT IGQAAIGARS SVLMITLFQT
IRQFGLVTML IPLQTQALSL LPNEIVPDAV ATFNTLRQIA AAFGTALIVS IVGIVNHLVH
NPSSHLGIQA GFLLCLCLLL TSLYLSTKLY HKISSQAQLE NA
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