Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0935 |
Symbol | |
ID | 5188203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 993714 |
End bp | 994370 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640590766 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001271534 |
Protein GI | 148544164 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.462816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAG CAGAACAATT AACTGCCATT AAAGAGTACA CCATTCAAAA ATTAGGTCAG GACAAGACTG GTCATGGGAT GGACCATATT AACCGCGTAG TAAAAATGAG TAAACGGTTA GCTATGGGCG AAAAAGTTGA CCCATTTTTG CCGATTGTGG CGGCCTACCT TCACGATACA ATTGATGAGA AATTAGTTGA TAACGTTGAG GCAGCTAAAC AAGAATTAGT TGATTACTTA AAGCAAAATG ACTTTAGTGA TGAACAAGTC AAAATAATTA TGGATGTCAT CAATAATATT TCTTTTGCTC ATACATTAGA TAAAGAGGAA GTCAAACTCT CCATCATTGG ACAAATAGTA CGTGATGCCG ACTGGTTAGA TGCAATCGGC ACAATTGGTA TTACCCGAGC AATCTATTAT GGAGGTGGTC ATCATGAAAA AATATACGAT CCAGCTATTA AGCCTCGTCA TAATATGTCC CGGGAAGAAT ATCGTAATTT AGCAAATGAA ACTATCATTA ATCACTTTGA TGAAAAGCTC TTACACCTAA AAGACATGAT GAACACTGAA ACTGCCAAGA AAATTGCAAA TCACCGTCAA CAAGTAATGC TCGATTTTCT TGACGAGTTT CATGCCGAAT GGGACGCAAA GATGTAA
|
Protein sequence | MKQAEQLTAI KEYTIQKLGQ DKTGHGMDHI NRVVKMSKRL AMGEKVDPFL PIVAAYLHDT IDEKLVDNVE AAKQELVDYL KQNDFSDEQV KIIMDVINNI SFAHTLDKEE VKLSIIGQIV RDADWLDAIG TIGITRAIYY GGGHHEKIYD PAIKPRHNMS REEYRNLANE TIINHFDEKL LHLKDMMNTE TAKKIANHRQ QVMLDFLDEF HAEWDAKM
|
| |