| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0929 |
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| Symbol | |
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| ID | 5188943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 985516 |
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| End bp | 986427 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590760 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_001271528 |
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| Protein GI | 148544158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG AATTAGAATT AACAATTGAT GGTGAGATGG TGGGAAGGAT TGATAAGCAG
CTTGGTCATC ACTTTGATCA ATTTTCCCGA TCACAAATTC AACATTGGAT AGAAGATGGT
CACGTCCTTG TTAATGGCAA GCAGGTAAAG CCTAAATATA AGTTGCTTGT AGGTGACCAC
GTCCAAATAA TTCCAGAAGA ACCACAAAAA ATTGATTTAG CACCTGAGGA TATTCCTCTT
GATATTGTAT ATGAAGATGA TGATGTTATT GTCGTTAATA AACCGCAGGG GATGGTCGTG
CATCCAGCAC CAGGTCATCC AGATCATACG CTTGTGAATG CTCTTTTATA TCATTCACCA
CTATCAACTA TTAACGGAGA ATTTCGGCCA GGAATTGTTC ATCGGATTGA TAAGGATACC
TCAGGACTAT TGATGGTAGC CAAAAATGAT ATGGCGCACC GTTCTTTGAC AGCTCAATTA
AAGGCAAAAA CTAATAAACG AGAATATGTT GCGCTTGTGC ATGGAGTTAT AAAAGAAGAT
AAAGGAACAA TTGATGCTCC ATTGGGTCGC TCATTAAAAG ACCGTAAGAA ACAGGCAGTT
GTAGTTGATG GACGTCATGC GGTAACCCAT TTTAATGTGT TAGAACGGTT TAAGAATTAT
ACCTTAGTTG CTTGTCAGCT AGAAACGGGA CGAACCCATC AGATTCGCGT TCATATGAAA
TATATTGGTC ATCCACTGGC AGGAGATCCG TTGTATGGGC CTCGAAAAAC ACTCGCTGGC
AATGGCCAAT ATTTACATGC TCGTTTGTTG GGCTTTAAAC ACCCCCGAAC AGGTAAAGAA
ATGGTTTTTA CGGCTCCATT ACCAGCTTAT TTTGTAAAAA TGCTTGAACA TTTACGCAAG
ACCGACCAAT AA
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| Protein sequence | MSEELELTID GEMVGRIDKQ LGHHFDQFSR SQIQHWIEDG HVLVNGKQVK PKYKLLVGDH
VQIIPEEPQK IDLAPEDIPL DIVYEDDDVI VVNKPQGMVV HPAPGHPDHT LVNALLYHSP
LSTINGEFRP GIVHRIDKDT SGLLMVAKND MAHRSLTAQL KAKTNKREYV ALVHGVIKED
KGTIDAPLGR SLKDRKKQAV VVDGRHAVTH FNVLERFKNY TLVACQLETG RTHQIRVHMK
YIGHPLAGDP LYGPRKTLAG NGQYLHARLL GFKHPRTGKE MVFTAPLPAY FVKMLEHLRK
TDQ
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