Gene Lreu_0921 details

Gene Information

• Locus tag: Lreu_0921
• Symbol: recU
• ID: 5189667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: -
• Start bp: 979830
• End bp: 980444
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640590752
• Product: Holliday junction-specific endonuclease
• Protein accession: YP_001271520
• Protein GI: 148544150
• COG category: [R] General function prediction only
• COG ID: [COG3331] Penicillin-binding protein-related factor A, putative recombinase
• TIGRFAM ID: [TIGR00648] recombination protein U

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.673716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCATTC ACTATCCCAA TGGTCAGCAA CCTGTACAAC ACTATAATAC ACATAATGAA 
TTACCGACAC CACATCAATC TATTTATGCT AAACGTGGGA TGTCGTTAGA GGATGAGATC 
AATCATAGTA ATCAGTACTA TTTAGCTCGC CACATTGCTG TTATTCATAA AAAGCCTACC 
CCTATTCAGC TTGTAAAAGT TGATTACCCC AAGCGGAGTG CGGCTGTTAT TAAAGAAGCA 
TATTTTCGAC GTCCATCAAC TACTGATTAC AATGGGGTGT ACCGTGGATA TTACATTGAT 
TTTGATGCTA AAGAAACACG TAATAAAAAT TCTTTTCCAT TAAAGAACTT TCATCCCCAC 
CAAATTCAGC ATATGCGTGA ATGTGTAGCA CAGGGGGGAA TTTGTTTTGC TTTCATTAAA 
TTTACGGAGC TTGACCTGCT ATACCTGCTT CCCGCTTCCA ACCTATTTAA ATATTGGGAC 
CAACAGCAAA ACGGCGGCCG TAAATCAATT TTGCGAACTG ATATCGCTAA AGAAGGCTAT 
CAAATTCATT ATCAACTCAA TCCGCGTTTA CCATATTTAA ACGCAGTTGA TAAAATAATT 
GCTGCAAAAG CGTAA 

 

Protein sequence

MTIHYPNGQQ PVQHYNTHNE LPTPHQSIYA KRGMSLEDEI NHSNQYYLAR HIAVIHKKPT 
PIQLVKVDYP KRSAAVIKEA YFRRPSTTDY NGVYRGYYID FDAKETRNKN SFPLKNFHPH 
QIQHMRECVA QGGICFAFIK FTELDLLYLL PASNLFKYWD QQQNGGRKSI LRTDIAKEGY 
QIHYQLNPRL PYLNAVDKII AAKA