Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0920 |
Symbol | |
ID | 5188267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 977554 |
End bp | 979818 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640590751 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001271519 |
Protein GI | 148544149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATG ATAATCAGTC AACGCGTAGT GAGCGTCATA ATAACAATGA CAATCAACAG CGCAATGTTG GCGGCTTAAT AAAGAAAATC TTGCTATGGG TAGCAGGAAT CGTCGTTCTA TTAATGGTGG CATCTGCAGC TTTATTTTTC TACTATGCCT CAAGCGCTCC TAAGATTAGT AGAAGCGACT TAACAAGTCA GAGTATTACG ACTATTTACG ATGATCAAAA TCGAGTAATT TCTCGTTTAG GAGCACAGAA ACGAGAATAT GCCAAGGATA ATCAAATTCC AAAGCAGTTA AAAAATGCTG TTGTTTCAAT TGAGGATCGC CGCTTCTACA AGCACCATGG TGTTGATACA ATTCGAATTC TTGGAGCAGC CACTTCTAAT GTTTTTGGTC GTTCAGCCGG GATGCAGGGG GGAAGTACGC TGACTCAACA GTTAGTTAAA TTATCCGTTT TCTCAACAGC GGCCTCTGAT CGAACATTAA AACGAAAAGC CCAAGAAGCT TGGCTTGCTA TTAATGTTGA GCAGCATTTT AGCAAGAGTC AGATTCTTGA TTTTTACATC AACAAGGTTT ACATGGGCAA TGGAATTTAT GGAATGCAAA CCGCAGCTCA GTACTACTAC GGTAAAGATT TAAACGATCT TGATCTTTCC CAATTAGCCC TTCTCGCCGG AATGCCACAA TCTCCTACTT ACTATAATCC ACTTGTAAGC AACACAAAGT ATGCAACGCA ACGGCGAAAT GAAGTATTGA ATGCGATGGT TCGCAGCAAT TACATTACCC AATCCCAGGC TAACCAAGCA GCAAGTGAAA GCGTTACTGC TGGTTTAGAT CCTGATCACG GTAATATTTC AGGAAGTGGA ACTGCTGTCG ATTCTAAGGT TGTTGACCCT TATGTAAAAC AGGTTCTTGC TGATTTACAA GCACAAGGAT ACAATCCTTA TAGTGATGGG TTAAAGGTTC ATACCAATCT TGACCTTGAT GCGCAACAAC ATCTTTACGA CGCTGCAAAC AAAAACGTTC AGTTCCAAAA TGACAAGATG CAAGCCGGAG TTGCTGTTAC CGATCCCCAT AACGGGCAAA TCATTGCCAT GCTTGGTGGC CGTCACACAG GAAATGTTGT GTATGGCCTT AACCGGGCTG TGCAAAGTAA CCGTAGTTCT GGGTCAACCG CAAAGCCATT AATGGATTAT GGTCCGGCTA TCGAATACTT GCAATGGCCA ACTTTCAAAT CAATTGCTGA TACGCGGTTT GTCTTTCCTG GTACCAATAC TGTCCTTCAT GATTTTGATA AAAAGTACAA GGGCAATATG ACAATGCGTG AGGCTTTAGT TCAATCACGG AATGTTCCTG CTATTCGCGC ATTGCAAGCC GTTGGGATTA AGCGTGCTAC TTCTTTCCTT GATGGATTAG GAATTTCGCA AAAACAACCA TATACTTTAC AAAACGGGAT TGCTTTGTAT ATCTCTCCAC TTCAAGTTTC TGCTGCATAT GCGGCCTTTG CTAATGGTGG TACTTACTAC AAGCCTTACT ACATTAGCTC GATTACTACT CAAGATGGTG CAGCAAAACA ATTCAATCCT AAAGGTAAAC GCGCAATGAA TAAGGCTACT GCCTACATGA TCACTGATAT GCTTAAAGGA GTTTTCACAG ACTCACAAGG AAGCGCAACT GACGCTCGAC TTGACGGTGT TAACCAAGCT GGTAAGACAG GGACGACAAA CTACCCGGGA AATTCTAGCC AGTCTGGCGT AATGGATTCC TGGATGGCCG GTTATACTAA GAATTACTCA ATTGCAGTTT GGACTGGTTA TGACCACCCA CTCGAACCTG GTGGCAGTAT TTCAGAACAA TATGTAAAGT CAGCGCAATT ACTTTACAAG GACTTAATGC AATACCTTGA CAGCCAAAAT CACGCATCTG ATTGGACGAT GCCAGACACT GTTGAAGCTG TTCGAGTTAA AGGTAAACGT CAGCTTGTAA TTCGTGATTC AAAATGGGCA TTCGATTATA CTGAAGATAC ATCGGATGAT CGTGATAGCA GTTCCACTTC TAGCTCAAGC GAATCATCAT CGTCTTCATC TTCTTCCAGT TCTGTTTCAA ATAGTAGCAG CGAAAGTCGT ACAGAAGAAC GAAACAATGC CCCAACTGAA TCTTCATCAA GTAGTGCTCC GGCTAGTTCA AGTTCATCTG CACCCGCACA AAGCTCAAGT TCTAGCCTTG CCCCTGCTAC GCAACCTAGC ACAGCCAACC CATGA
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Protein sequence | MSNDNQSTRS ERHNNNDNQQ RNVGGLIKKI LLWVAGIVVL LMVASAALFF YYASSAPKIS RSDLTSQSIT TIYDDQNRVI SRLGAQKREY AKDNQIPKQL KNAVVSIEDR RFYKHHGVDT IRILGAATSN VFGRSAGMQG GSTLTQQLVK LSVFSTAASD RTLKRKAQEA WLAINVEQHF SKSQILDFYI NKVYMGNGIY GMQTAAQYYY GKDLNDLDLS QLALLAGMPQ SPTYYNPLVS NTKYATQRRN EVLNAMVRSN YITQSQANQA ASESVTAGLD PDHGNISGSG TAVDSKVVDP YVKQVLADLQ AQGYNPYSDG LKVHTNLDLD AQQHLYDAAN KNVQFQNDKM QAGVAVTDPH NGQIIAMLGG RHTGNVVYGL NRAVQSNRSS GSTAKPLMDY GPAIEYLQWP TFKSIADTRF VFPGTNTVLH DFDKKYKGNM TMREALVQSR NVPAIRALQA VGIKRATSFL DGLGISQKQP YTLQNGIALY ISPLQVSAAY AAFANGGTYY KPYYISSITT QDGAAKQFNP KGKRAMNKAT AYMITDMLKG VFTDSQGSAT DARLDGVNQA GKTGTTNYPG NSSQSGVMDS WMAGYTKNYS IAVWTGYDHP LEPGGSISEQ YVKSAQLLYK DLMQYLDSQN HASDWTMPDT VEAVRVKGKR QLVIRDSKWA FDYTEDTSDD RDSSSTSSSS ESSSSSSSSS SVSNSSSESR TEERNNAPTE SSSSSAPASS SSSAPAQSSS SSLAPATQPS TANP
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