Gene Lreu_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0912 
Symbol 
ID5188589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp967919 
End bp968965 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content42% 
IMG OID640590743 
Productisopentenyl pyrophosphate isomerase 
Protein accessionYP_001271511 
Protein GI148544141 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000613252 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAT CACGTCATGC CCAACGAAAA AACGAACACC TTTCATTAGC TGCCAAATAT 
TATGACCAGG TTCATCAACA CCATTATTTT GATCAAGTGC GTCTAATTCA TGATAGCTTA
CCTGAAATGA CGACGGATGA TGTTGATTTG CATGTCCAAT TAGCTGATAA TTTAGAAATT
GAATGTCCTT TTTATATTGA AGCAATGACT GGCGGAAGTG ATCAAGCCCT TAAAATCAAC
CGGCAACTTG CTCAATTAGC CCATAAACAC CATTTGGCAA TGGCAACGGG ATCTCTCAGT
ATTATTTCAA AAGACCCTCA ATCCTTTTCG TCTTTTGAGA TAATCCGCGA AGAAAATCCA
GATGGCATTA TTTTTGCAAA TTTAAGTGCA AATGCCAGTC TTGACCAAGC GATAAATGCT
ATTTCCCTTC TGAAAGCAAA TGCCCTTGAA CTGCATATCA ATGCGGCCCA AGAATTAATT
ATGCCTGAGG GTGATCGTGA TTTTAACTGG TTAGATAATA TCCAGTATCT TGTCAGTGAG
CTCGAAGTCC CGGTTATTGT AAAAGAGGTT GGCTTTGGAA TGAGCAAAAC GACGATCGCC
AAACTGCAAA CCCATGATGT TCACCTCATC AATGTTAGTG GACGTGGCGG GACAAACTTT
GCGGCGATTG AGAATCGGCG TAACCATGAT ATTAATTTTG AGAGTTTATT GGACTGGGGA
CAAACAACTC CCGAGTCACT ACTGGAAGCT CATTCAATTC GGCGTGGTAA AACTGAAATT
ATTGCCTCTG GCGGAATTAC TTCTCCCCTC GATGTTATCA AGGCTGGTGT ATTAGGCGCT
CGGGCAGTTG GTGTTGCTGG TTACTTCCTC AATATTCTTC AAAATGAAGG CTATGAAGCA
TTAGACCAAA CGCTCGGTGA ATGGCAAGTG ATTGTCAAAC GCTTGCTCGC GCTCCTTGGT
TGCTCATCAT TTACCGTGCT TTCACGTGTT GAATATGTTT TAGGAACAGA CTTACTATCA
TATGCTCGTC AGCGACACTT ACGCTAA
 
Protein sequence
MMESRHAQRK NEHLSLAAKY YDQVHQHHYF DQVRLIHDSL PEMTTDDVDL HVQLADNLEI 
ECPFYIEAMT GGSDQALKIN RQLAQLAHKH HLAMATGSLS IISKDPQSFS SFEIIREENP
DGIIFANLSA NASLDQAINA ISLLKANALE LHINAAQELI MPEGDRDFNW LDNIQYLVSE
LEVPVIVKEV GFGMSKTTIA KLQTHDVHLI NVSGRGGTNF AAIENRRNHD INFESLLDWG
QTTPESLLEA HSIRRGKTEI IASGGITSPL DVIKAGVLGA RAVGVAGYFL NILQNEGYEA
LDQTLGEWQV IVKRLLALLG CSSFTVLSRV EYVLGTDLLS YARQRHLR