Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0912 |
Symbol | |
ID | 5188589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 967919 |
End bp | 968965 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590743 |
Product | isopentenyl pyrophosphate isomerase |
Protein accession | YP_001271511 |
Protein GI | 148544141 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000613252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT CACGTCATGC CCAACGAAAA AACGAACACC TTTCATTAGC TGCCAAATAT TATGACCAGG TTCATCAACA CCATTATTTT GATCAAGTGC GTCTAATTCA TGATAGCTTA CCTGAAATGA CGACGGATGA TGTTGATTTG CATGTCCAAT TAGCTGATAA TTTAGAAATT GAATGTCCTT TTTATATTGA AGCAATGACT GGCGGAAGTG ATCAAGCCCT TAAAATCAAC CGGCAACTTG CTCAATTAGC CCATAAACAC CATTTGGCAA TGGCAACGGG ATCTCTCAGT ATTATTTCAA AAGACCCTCA ATCCTTTTCG TCTTTTGAGA TAATCCGCGA AGAAAATCCA GATGGCATTA TTTTTGCAAA TTTAAGTGCA AATGCCAGTC TTGACCAAGC GATAAATGCT ATTTCCCTTC TGAAAGCAAA TGCCCTTGAA CTGCATATCA ATGCGGCCCA AGAATTAATT ATGCCTGAGG GTGATCGTGA TTTTAACTGG TTAGATAATA TCCAGTATCT TGTCAGTGAG CTCGAAGTCC CGGTTATTGT AAAAGAGGTT GGCTTTGGAA TGAGCAAAAC GACGATCGCC AAACTGCAAA CCCATGATGT TCACCTCATC AATGTTAGTG GACGTGGCGG GACAAACTTT GCGGCGATTG AGAATCGGCG TAACCATGAT ATTAATTTTG AGAGTTTATT GGACTGGGGA CAAACAACTC CCGAGTCACT ACTGGAAGCT CATTCAATTC GGCGTGGTAA AACTGAAATT ATTGCCTCTG GCGGAATTAC TTCTCCCCTC GATGTTATCA AGGCTGGTGT ATTAGGCGCT CGGGCAGTTG GTGTTGCTGG TTACTTCCTC AATATTCTTC AAAATGAAGG CTATGAAGCA TTAGACCAAA CGCTCGGTGA ATGGCAAGTG ATTGTCAAAC GCTTGCTCGC GCTCCTTGGT TGCTCATCAT TTACCGTGCT TTCACGTGTT GAATATGTTT TAGGAACAGA CTTACTATCA TATGCTCGTC AGCGACACTT ACGCTAA
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Protein sequence | MMESRHAQRK NEHLSLAAKY YDQVHQHHYF DQVRLIHDSL PEMTTDDVDL HVQLADNLEI ECPFYIEAMT GGSDQALKIN RQLAQLAHKH HLAMATGSLS IISKDPQSFS SFEIIREENP DGIIFANLSA NASLDQAINA ISLLKANALE LHINAAQELI MPEGDRDFNW LDNIQYLVSE LEVPVIVKEV GFGMSKTTIA KLQTHDVHLI NVSGRGGTNF AAIENRRNHD INFESLLDWG QTTPESLLEA HSIRRGKTEI IASGGITSPL DVIKAGVLGA RAVGVAGYFL NILQNEGYEA LDQTLGEWQV IVKRLLALLG CSSFTVLSRV EYVLGTDLLS YARQRHLR
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