Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0884 |
Symbol | |
ID | 5190134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 939291 |
End bp | 940475 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590716 |
Product | major facilitator transporter |
Protein accession | YP_001271484 |
Protein GI | 148544114 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA TAGGTAACTT TACAGTAGCA AAACGATGGG GATCTTTTTT GCTACTATAT TTAGGATATA TGATTCTATT TGCTGACCGA ACAGTGATGA ATATTTCCCT TGCTTACATC GGTAAAGACT TTCATGTTGG GGCAGCAGCA TTAGGGGCAA CCGCCAGTGC GTTTTTCTTA GGGTATACTT TAATGCAGAT ACCTGGCGGA TACTTAACTG ATAAGTTTGG CAGTAAACTG ATGGTGATTA TTTCCCTGTT TGCCTGGTCG TTGATGACGA TGGTGACTGG CTGGGCGTGG TCCCTTGCTG CCTTGATTGC GATTCGATTT CTATTTGGGA TTGCAGAAGG ACCATATCCA GCAGCAGCCT TAAAACGAAT TTCTGAAAAT TATGATAAGA GTGAGAAATC ACAGGCAACT TCTGCCTTAA TTTCATCGAA TTATGCTGGG GCAGCAGTAG CACCACTAAT TATTGTGCCA ATTATTGCTA GCAATGGTTG GCGAAATGCC TTTGTTTGGC TTGGGGTTGG CGGGTTTATT ATTTTGCTTG CCTATTACCT GGTAGAACGG CCAATTAATA GCAGCCAAGA AAATGGGCAG GCTCGTCCCA AGATTGAATG GAAAAAGATT GACCACCGTG TCTGGGCTTT TGTAGTAATT GGACTTGCCC TGAATATCAT TACTAAAGGG CTTGAAACCT GGATGCCAGT TTATTTCTTA CAAGAACAAG GAATTAATTT GAAGAACTTG GCATGGTTAG TACCATTACC AGTTATTTCT GGAGGCATTG CAGCATTTAT TTCTGGCTTT GTGATGGTGC ATTTGTTTAA GAAGCATGAA CGGTGGATGA TTAGTATTGC TTCATTCCTG ACTCTGGTTT TCATGTTTGG TCTCTTTAAG TCAACTTCAT TAGTAGGCGT TGTGATCTTT GATGTCTTGA TCTATTTCGT TAAATCATTG GCATTTACCG GTATCTTTAG TTTCATTGCA CAGATTTTAT CGGAGAAAAC TTATGGATCA TCAATTGGGA TTGTTAACTT TGGTGGGCAA CTTGGTGGTT TTGTTGGTCC GCTCTTAATT GGGTGGATTG TCCAAGCAGC CGGCTCATAT TCAGCTGCTT TCTTCGGCCT TGTTATCAGT GCATTAGTTG CAGTGATTGC ATGTTTATTT ATTAGGAAAG CATAA
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Protein sequence | MENIGNFTVA KRWGSFLLLY LGYMILFADR TVMNISLAYI GKDFHVGAAA LGATASAFFL GYTLMQIPGG YLTDKFGSKL MVIISLFAWS LMTMVTGWAW SLAALIAIRF LFGIAEGPYP AAALKRISEN YDKSEKSQAT SALISSNYAG AAVAPLIIVP IIASNGWRNA FVWLGVGGFI ILLAYYLVER PINSSQENGQ ARPKIEWKKI DHRVWAFVVI GLALNIITKG LETWMPVYFL QEQGINLKNL AWLVPLPVIS GGIAAFISGF VMVHLFKKHE RWMISIASFL TLVFMFGLFK STSLVGVVIF DVLIYFVKSL AFTGIFSFIA QILSEKTYGS SIGIVNFGGQ LGGFVGPLLI GWIVQAAGSY SAAFFGLVIS ALVAVIACLF IRKA
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