| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0878 |
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| Symbol | |
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| ID | 5188959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 932095 |
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| End bp | 933153 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640590710 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001271478 |
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| Protein GI | 148544108 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000117513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGATG CTTATTTCAT GCAAATGGCA ATCGCTGAAG CAGCAAAGGC TGGCAATGAA
ACTTGGAAAA ATCCTCGCGT TGGGGCAGTT GTTGTGAAAA ATGGTCAAGT TTTAGCGCGA
GGTCATACTC ACGAATACGG TGGAATTCAC GCTGAACGGG ATGCAATAGG TAAACTTACG
CCGAAACAGG GACAGGGGGC AACTCTTTAT GTCACGTTGG AACCCTGCAA TCACTATGGG
AAACAACCGC CATGTAGTCA GGCGATTATT GACGCGGGCA TCAGAAGGGT TGTGATTGCG
GAAACAGATC CGCACAAGCT TGTCACCGGG AAAGGAATTG CTACGCTTCA ACAGCAAAAT
ATTATTGTCA AAACGGGCGT CCTTAAAGAA GCAGCACAGG CCTTAAATCC GTATTACGAT
TTTTTCTATC GGTACCAACG ACCATGGGTA ACTTTAAAAC AAGCAGTGAG TCTTGACTAT
CGCGTGGCCG CAGAAAAAGG TCAACGAACG GCGATTACTA ATTCTGCTGT GGCAAAAATG
GTTCATACCG AGCGTGGTAA TTTTCAAGGA ATCTTGATTG GAAGCCAAAC CGCCATTATC
GATAATCCAA CTTTATTAAC GACTAGTCCG ACAAAGTTTC CGCCAGTAAG GATTGTTCTT
GACCGCCGGG GACGTTTAAA AGATAATCCA ACCTTACACT TGTTGACTGA CGGGCAGGCA
CCTACTTGGA TTTTTACGGA AAATAGTTCG CTACAAGATC AGTTTGCTAA AAGCATTCAG
GTATTTTATC GCCGGACGTG GTCAATTAAC GACATCTTGC ATGAACTTGG TCGACAAGAA
ATTCAATCTG TTTATGTAGA AGGGGGTCCG ACTGTTCATC AAGCGTTTTT ACGGAAAGGA
TTGTTTGAAG AGCTTATTAC TTATTTAGCT CCCCAGATGC TTGGCGAAAA AGGGGTGCCA
GGGATGGAGT CACCTCATCA ATTACATTTA GCCCATCAGG AAATTAAAGT TTTAGAGAAT
AATATTAGGA TTGCGGGAAG GAAGATGGAA CATGTTTAG
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| Protein sequence | MEDAYFMQMA IAEAAKAGNE TWKNPRVGAV VVKNGQVLAR GHTHEYGGIH AERDAIGKLT
PKQGQGATLY VTLEPCNHYG KQPPCSQAII DAGIRRVVIA ETDPHKLVTG KGIATLQQQN
IIVKTGVLKE AAQALNPYYD FFYRYQRPWV TLKQAVSLDY RVAAEKGQRT AITNSAVAKM
VHTERGNFQG ILIGSQTAII DNPTLLTTSP TKFPPVRIVL DRRGRLKDNP TLHLLTDGQA
PTWIFTENSS LQDQFAKSIQ VFYRRTWSIN DILHELGRQE IQSVYVEGGP TVHQAFLRKG
LFEELITYLA PQMLGEKGVP GMESPHQLHL AHQEIKVLEN NIRIAGRKME HV
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