| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0874 |
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| Symbol | |
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| ID | 5189857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 924309 |
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| End bp | 927434 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640590706 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001271474 |
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| Protein GI | 148544104 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAGTT ATCTTAACGA AGAAAATATA GAGGGCATTG CTTTAAGATG TCTTGATGAA
GTAGGCTATC AAGTCTACAA AAGTGCTAGT TATACTAGTC CGAATGTAGA AATAGATGCT
GAAAGAAATA ATGACCATAC ACAACCTATT TTAAAAGGAC AATTAGAAAA CGCTTTACGC
AAGTTAAATT CTGGACTTGA TGATGAAGTA TACCGTAATG CCATTCATCA ATTTGAAATG
CTAGCAGATA GCCCAGATAT GATGCTTAAT AACCATAAAC TTCATGAATT AATTATCGGC
GGAGCAAAAG TAAAAACATC AATTAAAGGT GAGGACCGGA CCATTACTTT GTATCCGATT
GATTTTAAAA ACGTTGATAA CAATACATTT ATTGCAACAA ATCAATTTAC AATGAAACAA
GGAGAACATG AAAGAAGACC AGACATTACT CTTTTTATTA ATGGGCTTCC TTTAGTTACC
TTTGAATTAA AGAACCCAGC AAATGCGAAT GTAGGTATTC AACAAGCTTT TGCCCAATTT
TCTACTTATA AAGAAGAAAT ATCTTCTTAT ATGCAATATA ACGAAATTTT AATTGTTTCT
GATGGAATTA ATGCGCGAGC TGGGTCATTA ACAGCGGGAA TTGATCGCTT TATGCGGTGG
CGCGAGCCGA AAAATGTAGA TATTGACGAT TCAATGATGG AATTAGAAGT ATTGATAAAA
TACATGCTTA CCCCATCTGA TTTATTAAAC ATCATTCAGA ATTTTATTCT TTTTGAAAGT
GATGGAGACA AGACAATCAA GATTTTAGCA GCATATCATC AATACTATAT GGTTAATAAA
GCTGTAAAAA GAACATCAAA AGTATTGGCT GACCCTGATG ACAAACGAAT TGGTGTTGTT
TGGCATACCA CTGGTTCTGG TAAATCATTG TCGATGGTCT TTTATTCTGG AATAGTAGCT
CGTAAACTTG GTAATCCAAC TATTTTAGTA ATTAATGATC GTAATGATTT AGATGATCAG
TTATTTGGTA CTTTTGCGGC TGCTCATGAA TATCTACAAC AAAACCCTGA TCACGCTGAA
TCACGAGGAG AAGTTCGTAA ATACATGAGT AAGAATTCTG GCGGGATTGT TTTTAGTACA
ATTCAAAAAT TCTCACCAAA CTTTGACGCA GGTGAAGAAC ATATGCCTAT ACTTACAAAC
CGTTCTAACG TTATCGTAAT GGTTGATGAA GCTCATCGGT CTCAATATGG AATGCAAGCA
AAACTAACCG ATAATGGTAT TCGTTATGGA TATGCTAAAT ATTTGCGTGA GGCTCTTCCT
AACGCCTCGT TTATTGGTTT TACAGGAACA CCAATAAATA CTGAAGATAA ATCTACCGTG
GCAATGTTTG GAAATTACAT TGATGTTTAT GATATTACTC AAGCAGTTAA TGATCATGCC
ACGGTCCGGA TTTATTATGA AAGTCACGTT TTCCCATTAA AGCTTAAGGA CAATGCAATT
GATGAATATC AAAAGTTAAT TAAAGAAGCT GGTATTAATG ACGATCCTAA TCTTAGAGAA
ACTGAGCGAC GGAATCGGGC ATTTACTAGA TTAGAGGCCC TTGCCGGTGC AAAACCACGG
TTAGAAAAAA TAGCCCAACA CTTTGTTCAT CATTTTGAAT CACGACAAAA GGAAGAATTT
GGTAAGTCGA TGATTGTTGA AATGTCACGA CAAAATGCAG TAAAGCTATA TAATGAAATT
GCAAAATTAC GTCCTGAGTG GATAAATGAT GATATTCATA AGGGAAAAAT CAAAGTTATT
ATGACGTCTA ATGCTTCTGA TGGCCCAGAA TTTGCTAAAT TTAAGACAAG CAAACAAGAC
CGATTTACGT TACAACAACG GATGAAAGAT AACGATGACG AATTACAAAT TGTAATAGTT
GTTGATATGT GGCTAACTGG ATTTGATGTT CCTAGCATGA ATACCATGTA CATTGACAAG
CCAATGCAAG GACATAATCT TATCCAGGCA ATTGCTCGTG TTAATCGAGT ATTTAAGAAT
AAAGATAGTG GGTTAATTGT CGATTACATT GGGATTGCTG ATGCTCTTCG TTTTGCCTTA
AATGTATACA CAAAAGATGA CCAAGGAAAA GTTGGAATTA ATGTTGATCG TGCACTAATG
CTTCTAAAAG AGAAATATGA CATTATTAAA GAAGATTTCC TATATGGGAT TGATTACTCA
GAATTTGATT CTGATGATAG CCAAACTCGT CAGAAGGCAG TTACTCGTGT TGTAAATGAA
TTAGCTGCAG AGGACGATGA AACAAAACAA AAATTCTTTG ATGTAGTAAC AGAACTTCAA
AAAGCTTATG CATTAGTTTC AACACAGCCG GAAGCCCAAG ATTTAAGTGC GGAGATAGCA
TTCTTTAAAA CGGTTAAAGT ATTCTTAACT AAGCTTGAGG CTCCTGACGA TCCAGATGAT
AGTAAAGAGA TTCATAGTTC TGTTGATTAT CGAATGCAAC AACTATTAGA TCAATCAATT
ATTTCAGAGC CGAACGTTGA CATTTATCGT GACCTAGGAT TAGAACGCCC TAACTTAGAT
TTAATCTCAG AACAATTTCT TGAAAAAGTA AATGAAATTA CTGAGAAAGA TCTAGCAATT
ACTCTTTTAG AGAAACTATT AAAAGGGCAA GTAAAAGCCT ACCAAAAAAC GAATATTGTT
AAAGGCAAGA AGTTTGAGGA ATTACTTCAA GAGTCAATTG ATGATTACAA TAGGCGGGGA
ATTACCAGTG AAATTGTAAT TAGAAAGTTA ATTGATATGG CTAAGGAAAT TAATAAAGAA
CAACAAGAAG GTAAGAATCT GGGACTTTCA AAAGAAGAAG TTGCCTTTTA TGATGCTTTA
GCTGATCATG AGAAAGCTGT TCAAGAATTA GGAGAAGAAA AGTTACATCT TATTGCTGCT
GAATTAGTAA AGACTGTAAA GCAACAATCA GGGGTTGATT GGGAGCGGCG CAGCAATGTT
CGTGCTAAAA TGCGTGTTGC AGTTAAACAT CTATTACGTA AGTATGGTTA TCCACCTGAT
ATTGCTCCAG ATGCCATTAA GACCGTAGTA AAGCAAGCTG AACAAATGGC TTCTCAAGAG
AGCTAA
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| Protein sequence | MASYLNEENI EGIALRCLDE VGYQVYKSAS YTSPNVEIDA ERNNDHTQPI LKGQLENALR
KLNSGLDDEV YRNAIHQFEM LADSPDMMLN NHKLHELIIG GAKVKTSIKG EDRTITLYPI
DFKNVDNNTF IATNQFTMKQ GEHERRPDIT LFINGLPLVT FELKNPANAN VGIQQAFAQF
STYKEEISSY MQYNEILIVS DGINARAGSL TAGIDRFMRW REPKNVDIDD SMMELEVLIK
YMLTPSDLLN IIQNFILFES DGDKTIKILA AYHQYYMVNK AVKRTSKVLA DPDDKRIGVV
WHTTGSGKSL SMVFYSGIVA RKLGNPTILV INDRNDLDDQ LFGTFAAAHE YLQQNPDHAE
SRGEVRKYMS KNSGGIVFST IQKFSPNFDA GEEHMPILTN RSNVIVMVDE AHRSQYGMQA
KLTDNGIRYG YAKYLREALP NASFIGFTGT PINTEDKSTV AMFGNYIDVY DITQAVNDHA
TVRIYYESHV FPLKLKDNAI DEYQKLIKEA GINDDPNLRE TERRNRAFTR LEALAGAKPR
LEKIAQHFVH HFESRQKEEF GKSMIVEMSR QNAVKLYNEI AKLRPEWIND DIHKGKIKVI
MTSNASDGPE FAKFKTSKQD RFTLQQRMKD NDDELQIVIV VDMWLTGFDV PSMNTMYIDK
PMQGHNLIQA IARVNRVFKN KDSGLIVDYI GIADALRFAL NVYTKDDQGK VGINVDRALM
LLKEKYDIIK EDFLYGIDYS EFDSDDSQTR QKAVTRVVNE LAAEDDETKQ KFFDVVTELQ
KAYALVSTQP EAQDLSAEIA FFKTVKVFLT KLEAPDDPDD SKEIHSSVDY RMQQLLDQSI
ISEPNVDIYR DLGLERPNLD LISEQFLEKV NEITEKDLAI TLLEKLLKGQ VKAYQKTNIV
KGKKFEELLQ ESIDDYNRRG ITSEIVIRKL IDMAKEINKE QQEGKNLGLS KEEVAFYDAL
ADHEKAVQEL GEEKLHLIAA ELVKTVKQQS GVDWERRSNV RAKMRVAVKH LLRKYGYPPD
IAPDAIKTVV KQAEQMASQE S
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