| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0846 |
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| Symbol | |
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| ID | 5189966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 895100 |
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| End bp | 898750 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640590678 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001271446 |
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| Protein GI | 148544076 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | [TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGTC CAGTTGTTGC AAAAGAGTTT CTTTGGAAAT TCCGTGATGA AATTACACAA
GGCGTCGCTA AAGCCCGTCA AGCTATGCAA GAAGCAGTTT CCGTAGCTAA AGAAGCAGGT
ATGAAAGTAT CTGATACTGG CGAAGATTGG AAAAAGATGG GTAACGATGC TGAAAACTCT
GCTCGTAAAG CCTCCCAAGC AGTTAAAGAA TCAGCAAATG CTTCTCGTGA AAGTATTGAG
AAAGTTAGGG TGCTAACAGA AAAGCTTAAT GACACAGTTG CCCGGATTCC GACTTCAAAA
TCTTTCAACT TAAAAGCAAA ATTTGATGAT AATAAGCTAA AAACTTTCTC TAGGAAAATT
CACGATATTC CTAAACAGAA ATCCTTATGG TTGAGGATAA AAGACGGCTT TTCTAATTAT
CTGAAAAACG CTCAACAAGA TGCTGACAAT ACGAAAAAGT CATTCTCTAA TCTAAGAGAA
GTAATGACTG GTACTTTCTT AGGAAATGCT GTTCTTAACG GTATTCATGG AATTAGTAAT
GGATTAAAAG GTCTCATTGC TACTGGGTAT CAATATACCC GACAACAGCA AACAATGATC
GCTAGTTGGA ATACGTTAAC TGGGTCTGCT TCTAAAGGTC AAGAAATGGT CGACATGACC
AACAAACTTG CTATTTCAGC TCAGAACTCA ACTGAAATGG TTAATGACTT AAATCAAAAG
TTTTACGCTG TCACGAATAG TGCTGGTAAG ACTAAAGACT TATCGCAAGC TGTCTTAACC
TTGCAAGATG CGTTTAATCA AAGCGATGCT TCTATTGAGA ATTTCTCAAC TCAATGGGCA
CAAATGGTCG GTAACGGTAA AGCAAGTGCG CAAGATATGT TATCAATTCA GAACGTATTT
CCAAAGTTCC GGCAAGAATT GTTAGCTTAT GAACGTGATG CAACCCATAA CAAAAACCTA
ACCATGCAGC AGATGAACGA CATGATGAGT CAAGGAAAAA TTAGTTCTAA GGCTATGAAT
GATGTTCTGA TTGGCATGGG TCATAAGTAC CAAGATGCTA CAAAGAACTT CACCAACACT
CTTGATGGTA TGGGGCGGAT TATCAAGACA ACGGCGCCAC GATTACTCGG CGCAATGGTC
GAACCGTTTA CCAAGGCGCA AAATCCAATT TATAAAGCTG TTTCTAACTG GGTATCTGAT
CCTAGAACAC TAAAAGAGTT TCAGAACGCT GGGAAGAATA TTGCTAACAC TTTTAATAGC
ACATTGAATG GCCTGTCAAC GGCATTTCAT GGGCTAGGTC AAGTTATGGG ACCCGTTATG
AAGTCATTCG GAAGCGGTGC TTGGGTCGGA TTCTCTACGA CACTTAAAGT CATTGCTGAA
GGGCTTGTAA CGATTACCTC GTTTGCTGGC AAAGTAGCTT CATCAATCAC TGGTATATCA
AAGCGACTCG GCTTCTTGAA AATTCAGCAG GCAGCTGCAA AAGCGCTTGG AGTTGCATTT
GGTGGGCTTG TAGCAGTCAT AGCGACGTAT AAGACGGTGT CACTTGCTTC TACTGCTGTA
ACAAAGACTT TTGCAGCTGC TCAAGCTGCA CTTAATGTTG TCATGGATGC AAATCCAATT
GGGCTTGTTG TCCTTGCTAT TACGGCATTG GTAGGCGCCT TTGTTCTTGC TTACAAACAC
ATTAAGCCAT TTAGAGACAT GGTTAATAAA ACAGGAGAAG CAATTAAGAA ACTTTTTACT
GGTAAATATG ATTGGGAACA ATCTTTCGGT AAAGGATTAT CTAAACTTGG AAAGAGTTTT
CAAAACTTTG CTAAGAAAAT ACCACAATTT TTCAAGGGTG TCGGCAAAGC AATAATAAAA
ACAATTGTTA TTGGTTTGGC GTTACCAGTT GGAATTGGTA TAACTCTAAT GAAACCATTG
ATAAAGCCGT TACAAAACAG TACCAAATCT TTAATTAAGA CTGTACAAAA GCAATGGCAA
AGTTTATCAA AGTGGCTTGG CAAATTGTTT GATCCTGTTG CTAAGTTATG GAATCGTGTT
TGGAACGGTT GGGCACGCAT TTTCAGCACT GTTTGGAAGT CGTTGAAAAA GACTGCTTCC
AGCGGAATGA AGGCGATCGA AAGATTGATA AGTCCCGCTG TTAAGGCTAT TGAAAAGGTG
TGGGTTACTA GTTGGGATGC AATTGCTAGT TTCTTTTCTG GCATTTGGCA CACTATTACC
TCACTAGGTG GAAATGGTAT GCGCATGCTA CATAGCGCCA TTGCAGGCCC GCTAAATACA
ATTAGTAGCA TTTGGCATTC TGTTTGGAAT AGCGTTTCAA GTTTCTTTAG GGGAATTTGG
AATGGTATTA AACAAGCTGC TCAAGACGGC ATGAATGGCG TTATTAACGT TATTAACGCT
GGTATCGGTG GAATTAATAA GGTTTGGAGT TTCTTCACTG GTCACGGTAC TGGTGTTAAA
GAACTAGGCC ATGTTCACTT TGCACAAGGT GGTACTGTTC ACCGGCACTT GTCCGTTATC
AATGATGGCG ATGGCCCTGA CTGGAAAGAA TTAGTCCAAA CACCTGATGG CAACTTGTTT
ATGTCACAAG AGCGTAATTG GACCGGCTTC TTGCCTGAGG GTACCCGAGT ATATAGTGGT
GCTGAAACAC GGCAGATCAT GAACACTGTA GGTGTTTCTC ATTATGCTGC TGGGGGTATC
GTAGGCGCTC AGCATTTTGC TGATGGCGGA ATTATTGGCG AAGGTATCGA CTGGGCTAAA
GGTTCACTTG AAAACATCGG CAGTTGGCTT GGCGACAAGT TCAGTGCTCT TGAAGATTTC
TTGGCTGACC CGTTAAAGGC TACTAAGGGA TTGCTAGAAA AGGCAACCAG TGGCCTATAT
AAAGGCTTAG GCAACTTTGC TGACGTTGCT CATGGTGCAA TGGATAAGCT TACCCAGCCA
ATTGCTGATT GGTTTAAGAA AGGTTTAGAA AAGCTTGAAG CTCAATTTGA GTCCGGTGGT
GCTAGTCCTG ACTTAATCCG TGCCGCTGCT GCTAAGATGC ACGTTGCTAT TTCTGGGGCT
GATATTAGCC ACATCATGAA TGTTATTAAA CATGAATCTG GTGGCAATGC TCGTGCTATT
AACAATTGGG ATAGCAATGC CAAAGCAGGC CATCCTTCTA AGGGTATTCT GCAATTTATT
GATGGTACTT TTAGGAAATA TGCCGTTGCA GGCCATACAA ACATTTACAG CCCGTTTGAT
CAATTATTGG CGATGTTTAA CGATACGACT TGGCGATCCG ATTTAACGCT TGGTGGTTGG
GGTCCAACAG GTGGTCGCCG GTTTGCAACT GGTGGCGAAG TGTTCGGATT AACTAATGCA
ATCATTGGCG ATAATCCTGA ACACCACGAA TTTGTCTTAA ATCCTTATGC GGTATCTGCT
GAACCACTGC TTGACAGAGC TTTTGAAGCT ACTGCGCAGG CTCAACCGGC TAACTCATCA
ACTGGCAACG GTAATTCTAA GCTGGATCAG ATGATTGATC TTCTTGGAAA GGTATTAGTT
GCTATTGAAA ACCAAGAGAC TGATATTTAC CTCGATGGTG AGAAGATCAC TGATAATTCT
AATAAGCGTA ATGCTAAAAA TTGGTCTTTG AGGAAAGGAA TATTATCATG A
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| Protein sequence | MSSPVVAKEF LWKFRDEITQ GVAKARQAMQ EAVSVAKEAG MKVSDTGEDW KKMGNDAENS
ARKASQAVKE SANASRESIE KVRVLTEKLN DTVARIPTSK SFNLKAKFDD NKLKTFSRKI
HDIPKQKSLW LRIKDGFSNY LKNAQQDADN TKKSFSNLRE VMTGTFLGNA VLNGIHGISN
GLKGLIATGY QYTRQQQTMI ASWNTLTGSA SKGQEMVDMT NKLAISAQNS TEMVNDLNQK
FYAVTNSAGK TKDLSQAVLT LQDAFNQSDA SIENFSTQWA QMVGNGKASA QDMLSIQNVF
PKFRQELLAY ERDATHNKNL TMQQMNDMMS QGKISSKAMN DVLIGMGHKY QDATKNFTNT
LDGMGRIIKT TAPRLLGAMV EPFTKAQNPI YKAVSNWVSD PRTLKEFQNA GKNIANTFNS
TLNGLSTAFH GLGQVMGPVM KSFGSGAWVG FSTTLKVIAE GLVTITSFAG KVASSITGIS
KRLGFLKIQQ AAAKALGVAF GGLVAVIATY KTVSLASTAV TKTFAAAQAA LNVVMDANPI
GLVVLAITAL VGAFVLAYKH IKPFRDMVNK TGEAIKKLFT GKYDWEQSFG KGLSKLGKSF
QNFAKKIPQF FKGVGKAIIK TIVIGLALPV GIGITLMKPL IKPLQNSTKS LIKTVQKQWQ
SLSKWLGKLF DPVAKLWNRV WNGWARIFST VWKSLKKTAS SGMKAIERLI SPAVKAIEKV
WVTSWDAIAS FFSGIWHTIT SLGGNGMRML HSAIAGPLNT ISSIWHSVWN SVSSFFRGIW
NGIKQAAQDG MNGVINVINA GIGGINKVWS FFTGHGTGVK ELGHVHFAQG GTVHRHLSVI
NDGDGPDWKE LVQTPDGNLF MSQERNWTGF LPEGTRVYSG AETRQIMNTV GVSHYAAGGI
VGAQHFADGG IIGEGIDWAK GSLENIGSWL GDKFSALEDF LADPLKATKG LLEKATSGLY
KGLGNFADVA HGAMDKLTQP IADWFKKGLE KLEAQFESGG ASPDLIRAAA AKMHVAISGA
DISHIMNVIK HESGGNARAI NNWDSNAKAG HPSKGILQFI DGTFRKYAVA GHTNIYSPFD
QLLAMFNDTT WRSDLTLGGW GPTGGRRFAT GGEVFGLTNA IIGDNPEHHE FVLNPYAVSA
EPLLDRAFEA TAQAQPANSS TGNGNSKLDQ MIDLLGKVLV AIENQETDIY LDGEKITDNS
NKRNAKNWSL RKGILS
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