Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0803 |
Symbol | |
ID | 5189530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 873859 |
End bp | 874632 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590635 |
Product | prophage antirepressor |
Protein accession | YP_001271403 |
Protein GI | 148544033 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000145423 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAC TATTTAATTT TAACGGACAG CAAGTCCGCA CAGTAACTAT TAACAATGAA CCTTACTTTG TAGGTAAGGA TGTGGCAACG ATTCTTGGAT ATAAGAAGCC TGAAAATGCC ATTGCCAATC ATGTAGAGAA CGAGGATAAA ACCACTACCC TGATTCAGGG GACTGGTTCT AATTACAAAT CCAAGTCAGT AATTATCAAT GAATCCGGCT TGTACTCATT AATTCTTAGT AGCAAGTTAC CAACCGCTAA AGAATTCAAG CACTGGGTAA CAAGTGAAGT TCTACCAGCT ATTCGTAAAC ATGGTGCCTA TATGACACCA CAAACAATCG AAAAGGCTCT CCTTAATCCA GATACAATTA TCAATCTTGC TACTCAGTTG AAAAAGGAAC AAGAGCAACG TAAGCAACTT CAAGCAGAGA ACGAACAGAT GAAACCTAAG GCTTTATTTG CGGATGCGGT TTCTACAAGC AACTCAAGCA TTCTAATTGG ACAGCTTGCC AAAATCCTTC GCCAAAACGG AGTAAATATT GGGCAAAATA GACTGTTTGC TTGGATGAGA AAGAATGGCT ACTTGGGAAC AAGAGGAAGT AATCGTAATG TTCCTACTCA GCGTTCGATG GAGTTAGGAC TATTCAAAAC TAAAGAAACA GTAATTAATC ATTCTGACGG GCATACAACT GTCAACATTA CAACGAAAGT AACTGGCAAA GGACAACAAT ATTTCATTAA CAAGTTCTTA AATGCACCAG TAATTGAAGC TTAG
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Protein sequence | MQQLFNFNGQ QVRTVTINNE PYFVGKDVAT ILGYKKPENA IANHVENEDK TTTLIQGTGS NYKSKSVIIN ESGLYSLILS SKLPTAKEFK HWVTSEVLPA IRKHGAYMTP QTIEKALLNP DTIINLATQL KKEQEQRKQL QAENEQMKPK ALFADAVSTS NSSILIGQLA KILRQNGVNI GQNRLFAWMR KNGYLGTRGS NRNVPTQRSM ELGLFKTKET VINHSDGHTT VNITTKVTGK GQQYFINKFL NAPVIEA
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