Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0794 |
Symbol | |
ID | 5190077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 866763 |
End bp | 867782 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590626 |
Product | LacI family transcription regulator |
Protein accession | YP_001271394 |
Protein GI | 148544024 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0417873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA AACAAATGAC GCAACATACT ACTATCGCTG ACGTTGCTAA AGCAGCTGGT GTTTCAGTGA CTACCGTTTC ACGTATTATC AATGGTCGTT ATGATAAAAT GCGCCCAGCA ACGCGGAAAC GGGTGGAAAA AGCAATTAAA GACCTTCACT TTGTTCCAAC CGCTTCCGCA CGACAGCTTC GACAAACTCA TAGTCACGTT GTCGGAATCC TCGTTGGAGA TATTTCTAAC CCCTTTTCAT CTTTACTTGC CAAAGGAATC GATGATGTTT TGCAACAAGC GGGCTATGAT ATCCTCCTCA TGAATACGAA CAACTCACGG GAAAATGAAA GTCGTGCTCT TCAGCGACTA TACCAACAAC GAGTTGACGG AATTATTGTC CAGCCTAATT CCCGTCACTT TAGTCAATTC GCCCCTGCTA TTCATAACGA CATTCCCCTC GTAATTGTCG ACCGTGAAGT TGATGACCAG CCTTCTACAG TTGGCAAGGT CACTTCTGCT AATCGTGATG CTTGTTATAA CCTCGGTAAG ATTCTGTATC AAAATGGTTA TCAGAATATT TTAACTGTCA GCGCACACTT TGCGGAGGCA TCTGGTCAGA TTCCTCGAAT TGCCGGTTTA AAGGTCGCTG CTGCTGATAA CGGGCTAAGC TATCACAATA TTGAAACCCG AGGACATGAT CGGCAGTGGC TTGCTAAAAC GTTTCTGCAA CAGTTAAATG AGCTTAAAGG CAAAACTGCT GTCGTTTCAT TAATGGGACC CATTTTATTT GACCTTTTAG CAATTTTTAA GGAATTAAAC CTTTCTTTCC CTGAAGATCT TGGCTTAGTT AGCTTTGATG ATTGGGAATG GTCGCAATAT GTCGCTAATG GAATTTTTCT GTTGAAGCAA GATATGGAGC TAATGGGTAG CTTAGCAGCT AATAAACTTT TAACGCAAAT TAACCAACAA AGCACGATCA GTTCCACTAC CCTTTTACCA GTTGAAATCA TTGCACACCA GTCACTTTAG
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Protein sequence | MMNKQMTQHT TIADVAKAAG VSVTTVSRII NGRYDKMRPA TRKRVEKAIK DLHFVPTASA RQLRQTHSHV VGILVGDISN PFSSLLAKGI DDVLQQAGYD ILLMNTNNSR ENESRALQRL YQQRVDGIIV QPNSRHFSQF APAIHNDIPL VIVDREVDDQ PSTVGKVTSA NRDACYNLGK ILYQNGYQNI LTVSAHFAEA SGQIPRIAGL KVAAADNGLS YHNIETRGHD RQWLAKTFLQ QLNELKGKTA VVSLMGPILF DLLAIFKELN LSFPEDLGLV SFDDWEWSQY VANGIFLLKQ DMELMGSLAA NKLLTQINQQ STISSTTLLP VEIIAHQSL
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