Gene Lreu_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0794 
Symbol 
ID5190077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp866763 
End bp867782 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID640590626 
ProductLacI family transcription regulator 
Protein accessionYP_001271394 
Protein GI148544024 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0417873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AACAAATGAC GCAACATACT ACTATCGCTG ACGTTGCTAA AGCAGCTGGT 
GTTTCAGTGA CTACCGTTTC ACGTATTATC AATGGTCGTT ATGATAAAAT GCGCCCAGCA
ACGCGGAAAC GGGTGGAAAA AGCAATTAAA GACCTTCACT TTGTTCCAAC CGCTTCCGCA
CGACAGCTTC GACAAACTCA TAGTCACGTT GTCGGAATCC TCGTTGGAGA TATTTCTAAC
CCCTTTTCAT CTTTACTTGC CAAAGGAATC GATGATGTTT TGCAACAAGC GGGCTATGAT
ATCCTCCTCA TGAATACGAA CAACTCACGG GAAAATGAAA GTCGTGCTCT TCAGCGACTA
TACCAACAAC GAGTTGACGG AATTATTGTC CAGCCTAATT CCCGTCACTT TAGTCAATTC
GCCCCTGCTA TTCATAACGA CATTCCCCTC GTAATTGTCG ACCGTGAAGT TGATGACCAG
CCTTCTACAG TTGGCAAGGT CACTTCTGCT AATCGTGATG CTTGTTATAA CCTCGGTAAG
ATTCTGTATC AAAATGGTTA TCAGAATATT TTAACTGTCA GCGCACACTT TGCGGAGGCA
TCTGGTCAGA TTCCTCGAAT TGCCGGTTTA AAGGTCGCTG CTGCTGATAA CGGGCTAAGC
TATCACAATA TTGAAACCCG AGGACATGAT CGGCAGTGGC TTGCTAAAAC GTTTCTGCAA
CAGTTAAATG AGCTTAAAGG CAAAACTGCT GTCGTTTCAT TAATGGGACC CATTTTATTT
GACCTTTTAG CAATTTTTAA GGAATTAAAC CTTTCTTTCC CTGAAGATCT TGGCTTAGTT
AGCTTTGATG ATTGGGAATG GTCGCAATAT GTCGCTAATG GAATTTTTCT GTTGAAGCAA
GATATGGAGC TAATGGGTAG CTTAGCAGCT AATAAACTTT TAACGCAAAT TAACCAACAA
AGCACGATCA GTTCCACTAC CCTTTTACCA GTTGAAATCA TTGCACACCA GTCACTTTAG
 
Protein sequence
MMNKQMTQHT TIADVAKAAG VSVTTVSRII NGRYDKMRPA TRKRVEKAIK DLHFVPTASA 
RQLRQTHSHV VGILVGDISN PFSSLLAKGI DDVLQQAGYD ILLMNTNNSR ENESRALQRL
YQQRVDGIIV QPNSRHFSQF APAIHNDIPL VIVDREVDDQ PSTVGKVTSA NRDACYNLGK
ILYQNGYQNI LTVSAHFAEA SGQIPRIAGL KVAAADNGLS YHNIETRGHD RQWLAKTFLQ
QLNELKGKTA VVSLMGPILF DLLAIFKELN LSFPEDLGLV SFDDWEWSQY VANGIFLLKQ
DMELMGSLAA NKLLTQINQQ STISSTTLLP VEIIAHQSL