| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0771 |
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| Symbol | |
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| ID | 5189805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 844635 |
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| End bp | 845279 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590604 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001271372 |
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| Protein GI | 148544002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATACAC AAAAAGAGAC AAGAGATCGG CGTACTTTGT TAATAGAAAT AGGTAATGCG
GTTACTCATG GGATCGGGGC AGGACTATCG ATCGCTGGCT TGATCTTGTT AATTATTAGA
GCTGTTCATA CTGGTAGTCC CATGCGAATT GTTACCTTTA CTATTTACGG AAGTGCTTTA
ATTCTTTTTT ACCTTTCGTC AACCTTATTT CATGCCTTGA TCTTTACACG AGCCAAACGG
GTTTTTCAAA TTCTCGACCA TTCAATGATC TTTGTGCTTA TTGCCGCAAC TTATACCCCC
TATTGCTTAG TTAGCATTCG CGGCTGGTTA GGTTGGACAA TTTTCGGAGT GATTTGGGGC
CTATCCGTTA TCGGAATCGT GTATAAATGT ATTTGGTTAA AACATAAAAG TAAATATTCA
ACCATTATTT ACATTCTTAT GGGCTGGCTA TGTCTAGTCG CCTTCATGCC TCTCTGGCGT
GCACTTGGTC CAGTTGGCTT CGGCTTGCTT TTACTAGGAG GACTTTCCTT TACTCTTGGG
GCCCTCTTTT ACAGTCGTCC AACGGCATAT ACCCATTTGA TTTGGCATAT TTTTGTCCTC
ATCGGCACGA TATTAATGTA TTTTTCAATT CTTTTATACG TTTAG
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| Protein sequence | MDTQKETRDR RTLLIEIGNA VTHGIGAGLS IAGLILLIIR AVHTGSPMRI VTFTIYGSAL
ILFYLSSTLF HALIFTRAKR VFQILDHSMI FVLIAATYTP YCLVSIRGWL GWTIFGVIWG
LSVIGIVYKC IWLKHKSKYS TIIYILMGWL CLVAFMPLWR ALGPVGFGLL LLGGLSFTLG
ALFYSRPTAY THLIWHIFVL IGTILMYFSI LLYV
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